Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_6T83_0011/1b/38:45No text annotation
Not in a motif group
homologous
HL_8C3A_001
HL_06192.2
HL_6T83_0021/1b/69:74No text annotation
Not in a motif group
homologous
HL_8C3A_002
HL_02862.2
HL_6T83_0031/1b/90:96No text annotation
Not in a motif group
homologous
HL_8C3A_003
HL_67216.7
HL_6T83_0041/1b/132:136No text annotation
Not in a motif group
homologous
HL_5TBW_004
HL_98426.1
HL_6T83_0051/1b/194:201No text annotation
Not in a motif group
homologous
HL_8C3A_005
HL_89380.2
HL_6T83_0061/1b/208:212No text annotation
Not in a motif group
homologous
HL_5TBW_006
HL_98984.2
HL_6T83_0071/1b/216:224No text annotation
Not in a motif group
homologous
HL_5TBW_007
HL_08002.8
HL_6T83_0081/1b/278:287No text annotation
Not in a motif group
homologous
HL_8C3A_008
HL_71554.2
HL_6T83_0091/1b/303:312No text annotation
Not in a motif group
homologous
HL_8C3A_009
HL_12078.2
HL_6T83_0101/1b/357:362Other HL
Not in a motif group
homologous
HL_5TBW_010
HL_42097.1
HL_6T83_0111/1b/382:387No text annotation
Not in a motif group
homologous
HL_8C3A_011
HL_42097.1
HL_6T83_0121/1b/543:548No text annotation
Not in a motif group
homologous
HL_5TBW_012
HL_86373.2
HL_6T83_0131/1b/599:604GNRA
Not in a motif group
homologous
HL_5TBW_013
HL_42097.1
HL_6T83_0141/1b/640:649No text annotation
Not in a motif group
homologous
HL_8C3A_014
HL_89380.2
HL_6T83_0151/1b/686:694No text annotation
Not in a motif group
homologous
HL_5TBW_015
HL_03345.1
HL_6T83_0161/1b/707:712No text annotation
Not in a motif group
homologous
HL_8C3A_016
HL_42097.1
HL_6T83_0171/1b/732:737GNRA
Not in a motif group
homologous
HL_5TBW_017
HL_42097.1
HL_6T83_0181/1b/763:768No text annotation
Not in a motif group
geometric
HL_5TBW_018
HL_34168.2
HL_6T83_0191/1b/844:849No text annotation
Not in a motif group
HL_6T83_0201/1b/876:885No text annotation
Not in a motif group
homologous
HL_5TBW_020
HL_39334.6
HL_6T83_0211/1b/910:918No text annotation
Not in a motif group
homologous
HL_5TBW_021
HL_33817.1
HL_6T83_0221/1b/958:963No text annotation
Not in a motif group
homologous
HL_8C3A_022
HL_96598.1
HL_6T83_0231/1b/1023:1029GNRA
Not in a motif group
homologous
HL_5TBW_023
HL_42097.1
HL_6T83_0241/1b/1076:1083No text annotation
Not in a motif group
homologous
HL_8C3A_024
HL_71554.2
HL_6T83_0251/1b/1126:1132No text annotation
Not in a motif group
homologous
HL_8C3A_025
HL_42097.1
HL_6T83_0261/1b/1148:1155No text annotation
Not in a motif group
homologous
HL_8C3A_026
HL_64430.2
HL_6T83_0271/1b/1239:1249No text annotation
Not in a motif group
homologous
HL_5TBW_027
HL_07145.1
HL_6T83_0281/1b/1267:1274No text annotation
Not in a motif group
homologous
HL_8C3A_028
HL_84085.2
HL_6T83_0291/1b/1347:1357No text annotation
Not in a motif group
homologous
HL_5TBW_029
HL_89098.1
HL_6T83_0301/1b/1403:1408No text annotation
Not in a motif group
homologous
HL_8C3A_030
HL_42097.1
HL_6T83_0311/1b/1462:1470No text annotation
Not in a motif group
homologous
HL_8C3A_031
HL_89380.2
HL_6T83_0321/1b/1506:1512No text annotation
Not in a motif group
homologous
HL_8C3A_032
HL_46680.1
HL_6T83_0331/1b/1544:1549No text annotation
Not in a motif group
homologous
HL_8C3A_033
HL_76539.2
HL_6T83_0341/1b/1565:1574No text annotation
Not in a motif group
HL_6T83_0351/1b/1599:1608No text annotation
Not in a motif group
homologous
HL_8C3A_035
HL_69023.2
HL_6T83_0361/1b/1634:1639No text annotation
Not in a motif group
homologous
HL_8C3A_036
HL_42097.1
HL_6T83_0371/1b/1680:1688No text annotation
Not in a motif group
homologous
HL_8C3A_037
HL_60812.1
HL_6T83_0381/1b/1719:1725No text annotation
Not in a motif group
homologous
HL_5TBW_038
HL_86373.2
HL_6T83_0391/1b/1760:1765Other HL
Not in a motif group
homologous
HL_5TBW_039
HL_56691.2
HL_6T83_0401/1b/1792:1796No text annotation
Not in a motif group
homologous
HL_8C3A_040
HL_49678.1
HL_6T83_0411/1b/1844:1851No text annotation
Not in a motif group
homologous
HL_8C3A_041
HL_64430.2
HL_6T83_0421/1b/1862:1868GNRA with one bulged base
Not in a motif group
homologous
HL_5TBW_042
HL_42097.1
HL_6T83_0431/1b/1923:1928No text annotation
Not in a motif group
geometric
HL_7RQB_042
HL_03562.2
HL_6T83_0451/1b/2110:2114No text annotation
Not in a motif group
homologous
HL_8C3A_045
HL_20062.1
HL_6T83_0461/1b/2135:2145No text annotation
Not in a motif group
homologous
HL_8C3A_046
HL_43613.5
HL_6T83_0471/1b/2164:2170No text annotation
Not in a motif group
homologous
HL_8C3A_047
HL_42097.1
HL_6T83_0481/1b/2220:2225No text annotation
Not in a motif group
homologous
HL_8C3A_048
HL_42097.1
HL_6T83_0491/1b/2253:2263No text annotation
Not in a motif group
homologous
HL_8C3A_049
HL_71924.2
HL_6T83_0501/1b/2292:2300No text annotation
Not in a motif group
homologous
HL_8C3A_050
HL_51824.1
HL_6T83_0511/1b/2369:2378No text annotation
Not in a motif group
homologous
HL_8C3A_051
HL_90642.6
HL_6T83_0531/1b/2535:2544No text annotation
Not in a motif group
HL_6T83_0541/1b/2568:2573No text annotation
Not in a motif group
geometric
HL_2Y8W_001
HL_01057.1
HL_6T83_0551/1b/2616:2624No text annotation
Not in a motif group
homologous
HL_5TBW_054
HL_53171.2
HL_6T83_0561/1b/2633:2645No text annotation
Not in a motif group
homologous
HL_5TBW_055
HL_19870.6
HL_6T83_0571/1b/2673:2681No text annotation
Not in a motif group
homologous
HL_8C3A_057
HL_76406.4
HL_6T83_0581/1b/2693:2700No text annotation
Not in a motif group
homologous
HL_8C3A_058
HL_12078.2
HL_6T83_0591/1b/2724:2732No text annotation
Not in a motif group
homologous
HL_8C3A_059
HL_92229.2
HL_6T83_0601/1b/2744:2749No text annotation
Not in a motif group
homologous
HL_8C3A_060
HL_42097.1
HL_6T83_0611/1b/2776:2784No text annotation
Not in a motif group
homologous
HL_8C3A_061
HL_96598.1
HL_6T83_0621/1b/2840:2848No text annotation
Not in a motif group
homologous
HL_5TBW_061
HL_06192.2
HL_6T83_0631/1b/2897:2904No text annotation
Not in a motif group
homologous
HL_5TBW_062
HL_88526.2
HL_6T83_0641/1b/2920:2926No text annotation
Not in a motif group
homologous
HL_8C3A_064
HL_43656.2
HL_6T83_0651/1b/2963:2968GNRA
Not in a motif group
homologous
HL_5TBW_064
HL_42097.1
HL_6T83_0661/1b/3025:3030No text annotation
Not in a motif group
homologous
HL_8C3A_066
HL_42097.1
HL_6T83_0671/1b/3068:3073No text annotation
Not in a motif group
homologous
HL_8C3A_067
HL_46680.1
HL_6T83_0681/1b/3110:3124No text annotation
Not in a motif group
homologous
HL_8C3A_068
HL_56677.7
HL_6T83_0691/1b/3194:3197No text annotation
Not in a motif group
geometric
HL_4V88_192
HL_53837.1
HL_6T83_0701/1b/3240:3247No text annotation
Not in a motif group
homologous
HL_5TBW_069
HL_14449.2
HL_6T83_0711/1b/3303:3311No text annotation
Not in a motif group
geometric
HL_5TBW_070
HL_27930.1
HL_6T83_0721/1b/3350:3353No text annotation
Not in a motif group
geometric
HL_5F9R_002
HL_38927.2
HL_6T83_0731/2b/7:17No text annotation
Not in a motif group
homologous
HL_4V88_186
HL_89881.2
HL_6T83_0741/2b/70:81No text annotation
Not in a motif group
HL_6T83_0751/2b/154:160Other HL
Not in a motif group
homologous
HL_4V88_188
HL_76539.2
HL_6T83_0761/2b/190:195No text annotation
Not in a motif group
geometric
HL_2Y8W_001
HL_01057.1
HL_6T83_0771/2b/230:235No text annotation
Not in a motif group
HL_6T83_0781/2b/243:250T-loop with 1 bulged base
Not in a motif group
homologous
HL_4V88_191
HL_27930.1
HL_6T83_0791/2b/276:279No text annotation
Not in a motif group
geometric
HL_4V88_192
HL_53837.1
HL_6T83_0801/2b/330:338No text annotation
Not in a motif group
homologous
HL_4V88_193
HL_69023.2
HL_6T83_0811/2b/367:374No text annotation
Not in a motif group
geometric
HL_5TBW_012
HL_86373.2
HL_6T83_0821/2b/393:404No text annotation
Not in a motif group
homologous
HL_4V88_195
HL_84288.1
HL_6T83_0831/2b/414:419UNCG
Not in a motif group
homologous
HL_4V88_196
HL_03562.2
HL_6T83_0841/2b/450:456No text annotation
Not in a motif group
homologous
HL_4V88_197
HL_09136.1
HL_6T83_0851/2b/491:496No text annotation
Not in a motif group
geometric
HL_2Y8W_001
HL_01057.1
HL_6T83_0861/2b/520:532No text annotation
Not in a motif group
homologous
HL_4V88_199
HL_06285.2
HL_6T83_0871/2b/569:574Other HL
Not in a motif group
homologous
HL_4V88_200
HL_53845.1
HL_6T83_0891/2b/764:772No text annotation
Not in a motif group
homologous
HL_4V88_203
HL_46766.2
HL_6T83_0901/2b/777:783No text annotation
Not in a motif group
HL_6T83_0911/2b/829:843No text annotation
Not in a motif group
homologous
HL_4V88_205
HL_96598.1
HL_6T83_0921/2b/900:909No text annotation
Not in a motif group
homologous
HL_4V88_206
HL_12326.1
HL_6T83_0931/2b/937:942Other HL
Not in a motif group
homologous
HL_4V88_207
HL_87030.2
HL_6T83_0941/2b/997:1007No text annotation
Not in a motif group
homologous
HL_4V88_208
HL_12326.1
HL_6T83_0951/2b/1055:1064No text annotation
Not in a motif group
geometric
HL_5UD5_002
HL_49288.1
HL_6T83_0961/2b/1084:1089Other HL
Not in a motif group
homologous
HL_4V88_210
HL_42097.1
HL_6T83_0971/2b/1121:1126GNRA
Not in a motif group
homologous
HL_4V88_211
HL_42097.1
HL_6T83_0981/2b/1188:1197No text annotation
Not in a motif group
homologous
HL_4V88_212
HL_73530.2
HL_6T83_0991/2b/1238:1247No text annotation
Not in a motif group
homologous
HL_4V88_213
HL_53597.2
HL_6T83_1001/2b/1296:1301GNRA
Not in a motif group
homologous
HL_4V88_214
HL_42097.1
HL_6T83_1011/2b/1309:1316No text annotation
Not in a motif group
homologous
HL_4V88_215
HL_71554.2
HL_6T83_1021/2b/1359:1364No text annotation
Not in a motif group
homologous
HL_4V88_216
HL_10278.1
HL_6T83_1031/2b/1396:1402No text annotation
Not in a motif group
homologous
HL_4V88_217
HL_42097.1
HL_6T83_1041/2b/1501:1506GNRA
Not in a motif group
homologous
HL_4V88_218
HL_42097.1
HL_6T83_1051/2b/1550:1561No text annotation
Not in a motif group
homologous
HL_4V88_219
HL_22554.1
HL_6T83_1061/2b/1594:1602No text annotation
Not in a motif group
homologous
HL_4V88_220
HL_60812.1
HL_6T83_1081/2b/1778:1783Other HL
Not in a motif group
homologous
HL_4V88_222
HL_16173.1
HL_6T83_1091/3b/47:56No text annotation
Not in a motif group
geometric
HL_7A0S_001
HL_99167.1
HL_6T83_1101/3b/69:89No text annotation
Not in a motif group
HL_6T83_1111/3b/108:114No text annotation
Not in a motif group
homologous
HL_5TBW_075
HL_87939.1
HL_6T83_1121/3b/124:129No text annotation
Not in a motif group
homologous
HL_5TBW_076
HL_96851.2
HL_6T83_1131/4b/36:41No text annotation
Not in a motif group
homologous
HL_5TBW_185
HL_87939.1
HL_6T83_1141/4b/88:93GNRA
Not in a motif group
homologous
HL_5TBW_186
HL_42097.1
HL_6T83_1151/6b/13:22No text annotation
Not in a motif group
homologous
HL_3KFU_004
NA
HL_6T83_1161/6b/31:39tRNA anticodon loop
Not in a motif group
homologous
HL_6UFM_002
HL_53597.2
HL_6T83_1171/6b/53:61T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_6PMO_005
HL_22280.1
HL_6T83_1181/8/13:22No text annotation
Not in a motif group
homologous
HL_1QF6_001
NA
HL_6T83_1191/8/31:39tRNA anticodon loop
Not in a motif group
homologous
HL_4V9Q_214
HL_53597.2
HL_6T83_1201/8/53:61T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_6PMO_005
HL_22280.1
HL_6T83_1211/Aa/38:45No text annotation
Not in a motif group
homologous
HL_8C3A_001
HL_06192.2
HL_6T83_1221/Aa/69:74No text annotation
Not in a motif group
homologous
HL_8C3A_002
HL_02862.2
HL_6T83_1231/Aa/90:96No text annotation
Not in a motif group
homologous
HL_8C3A_003
HL_67216.7
HL_6T83_1241/Aa/132:136No text annotation
Not in a motif group
homologous
HL_5TBW_004
HL_98426.1
HL_6T83_1251/Aa/194:201No text annotation
Not in a motif group
homologous
HL_8C3A_005
HL_89380.2
HL_6T83_1261/Aa/208:212No text annotation
Not in a motif group
homologous
HL_5TBW_006
HL_98984.2
HL_6T83_1271/Aa/216:224No text annotation
Not in a motif group
homologous
HL_8C3A_007
HL_08002.8
HL_6T83_1281/Aa/278:287No text annotation
Not in a motif group
homologous
HL_8C3A_008
HL_71554.2
HL_6T83_1291/Aa/303:312No text annotation
Not in a motif group
homologous
HL_5TBW_009
HL_12078.2
HL_6T83_1301/Aa/357:362No text annotation
Not in a motif group
homologous
HL_8C3A_010
HL_42097.1
HL_6T83_1311/Aa/382:387GNRA
Not in a motif group
homologous
HL_5TBW_011
HL_42097.1
HL_6T83_1321/Aa/543:548No text annotation
Not in a motif group
homologous
HL_5TBW_012
HL_86373.2
HL_6T83_1331/Aa/599:604GNRA
Not in a motif group
homologous
HL_5TBW_013
HL_42097.1
HL_6T83_1341/Aa/640:649No text annotation
Not in a motif group
homologous
HL_8C3A_014
HL_89380.2
HL_6T83_1351/Aa/686:694No text annotation
Not in a motif group
homologous
HL_8C3A_015
HL_03345.1
HL_6T83_1361/Aa/707:712No text annotation
Not in a motif group
homologous
HL_8C3A_016
HL_42097.1
HL_6T83_1371/Aa/732:737GNRA
Not in a motif group
homologous
HL_5TBW_017
HL_42097.1
HL_6T83_1381/Aa/763:768No text annotation
Not in a motif group
homologous
HL_5TBW_018
HL_34168.2
HL_6T83_1391/Aa/844:849No text annotation
Not in a motif group
homologous
HL_8C3A_019
HL_42097.1
HL_6T83_1401/Aa/876:885No text annotation
Not in a motif group
homologous
HL_8C3A_020
HL_39334.6
HL_6T83_1411/Aa/910:918No text annotation
Not in a motif group
homologous
HL_8C3A_021
HL_33817.1
HL_6T83_1421/Aa/958:963No text annotation
Not in a motif group
homologous
HL_8C3A_022
HL_96598.1
HL_6T83_1431/Aa/1023:1029No text annotation
Not in a motif group
HL_6T83_1441/Aa/1076:1083No text annotation
Not in a motif group
homologous
HL_5TBW_024
HL_71554.2
HL_6T83_1451/Aa/1126:1132GNRA
Not in a motif group
homologous
HL_5TBW_025
HL_42097.1
HL_6T83_1461/Aa/1148:1155No text annotation
Not in a motif group
homologous
HL_8C3A_026
HL_64430.2
HL_6T83_1471/Aa/1239:1249No text annotation
Not in a motif group
homologous
HL_8C3A_027
HL_07145.1
HL_6T83_1481/Aa/1267:1274No text annotation
Not in a motif group
homologous
HL_8C3A_028
HL_84085.2
HL_6T83_1501/Aa/1403:1408No text annotation
Not in a motif group
homologous
HL_8C3A_030
HL_42097.1
HL_6T83_1511/Aa/1462:1470No text annotation
Not in a motif group
homologous
HL_8C3A_031
HL_89380.2
HL_6T83_1521/Aa/1506:1512No text annotation
Not in a motif group
homologous
HL_8C3A_032
HL_46680.1
HL_6T83_1531/Aa/1544:1549No text annotation
Not in a motif group
homologous
HL_8C3A_033
HL_76539.2
HL_6T83_1551/Aa/1599:1608No text annotation
Not in a motif group
homologous
HL_8C3A_035
HL_69023.2
HL_6T83_1561/Aa/1634:1639No text annotation
Not in a motif group
homologous
HL_8C3A_036
HL_42097.1
HL_6T83_1571/Aa/1680:1688No text annotation
Not in a motif group
homologous
HL_8C3A_037
HL_60812.1
HL_6T83_1581/Aa/1719:1725No text annotation
Not in a motif group
homologous
HL_5TBW_038
HL_86373.2
HL_6T83_1591/Aa/1760:1765Other HL
Not in a motif group
homologous
HL_5TBW_039
HL_56691.2
HL_6T83_1601/Aa/1792:1796No text annotation
Not in a motif group
homologous
HL_8C3A_040
HL_49678.1
HL_6T83_1611/Aa/1844:1851No text annotation
Not in a motif group
homologous
HL_5TBW_041
HL_64430.2
HL_6T83_1621/Aa/1862:1868GNRA with one bulged base
Not in a motif group
homologous
HL_5TBW_042
HL_42097.1
HL_6T83_1631/Aa/1923:1928UNCG
Not in a motif group
geometric
HL_4V88_196
HL_03562.2
HL_6T83_1651/Aa/2110:2114No text annotation
Not in a motif group
homologous
HL_5TBW_045
HL_20062.1
HL_6T83_1661/Aa/2135:2145No text annotation
Not in a motif group
homologous
HL_8C3A_046
HL_43613.5
HL_6T83_1671/Aa/2164:2170No text annotation
Not in a motif group
homologous
HL_8C3A_047
HL_42097.1
HL_6T83_1681/Aa/2220:2225No text annotation
Not in a motif group
homologous
HL_8C3A_048
HL_42097.1
HL_6T83_1691/Aa/2253:2263No text annotation
Not in a motif group
homologous
HL_8C3A_049
HL_71924.2
HL_6T83_1701/Aa/2292:2300No text annotation
Not in a motif group
homologous
HL_8C3A_050
HL_51824.1
HL_6T83_1711/Aa/2369:2378No text annotation
Not in a motif group
homologous
HL_5TBW_051
HL_90642.6
HL_6T83_1731/Aa/2534:2545No text annotation
Not in a motif group
HL_6T83_1741/Aa/2568:2573No text annotation
Not in a motif group
HL_6T83_1751/Aa/2616:2624No text annotation
Not in a motif group
homologous
HL_5TBW_054
HL_53171.2
HL_6T83_1761/Aa/2633:2645No text annotation
Not in a motif group
homologous
HL_5TBW_055
HL_19870.6
HL_6T83_1771/Aa/2673:2681No text annotation
Not in a motif group
homologous
HL_8C3A_057
HL_76406.4
HL_6T83_1781/Aa/2693:2700No text annotation
Not in a motif group
homologous
HL_8C3A_058
HL_12078.2
HL_6T83_1791/Aa/2724:2732No text annotation
Not in a motif group
homologous
HL_8C3A_059
HL_92229.2
HL_6T83_1801/Aa/2743:2750No text annotation
Not in a motif group
geometric
HL_7A0S_056
HL_84085.2
HL_6T83_1811/Aa/2776:2784No text annotation
Not in a motif group
homologous
HL_8C3A_061
HL_96598.1
HL_6T83_1821/Aa/2840:2848No text annotation
Not in a motif group
homologous
HL_5TBW_061
HL_06192.2
HL_6T83_1831/Aa/2897:2904No text annotation
Not in a motif group
homologous
HL_8C3A_063
HL_88526.2
HL_6T83_1841/Aa/2920:2926No text annotation
Not in a motif group
geometric
HL_5TBW_063
HL_43656.2
HL_6T83_1851/Aa/2963:2968No text annotation
Not in a motif group
homologous
HL_8C3A_065
HL_42097.1
HL_6T83_1861/Aa/3025:3030GNRA
Not in a motif group
geometric
HL_4V9F_066
HL_42097.1
HL_6T83_1871/Aa/3068:3073No text annotation
Not in a motif group
homologous
HL_8C3A_067
HL_46680.1
HL_6T83_1881/Aa/3110:3124No text annotation
Not in a motif group
homologous
HL_8C3A_068
HL_56677.7
HL_6T83_1891/Aa/3194:3197No text annotation
Not in a motif group
geometric
HL_5TBW_068
HL_98426.1
HL_6T83_1901/Aa/3240:3247No text annotation
Not in a motif group
homologous
HL_5TBW_069
HL_14449.2
HL_6T83_1911/Aa/3303:3311No text annotation
Not in a motif group
homologous
HL_5TBW_070
HL_27930.1
HL_6T83_1921/Aa/3350:3353No text annotation
Not in a motif group
geometric
HL_4V88_192
HL_53837.1
HL_6T83_1931/Bb/36:41No text annotation
Not in a motif group
geometric
HL_5NFV_001
HL_76539.2
HL_6T83_1941/Bb/88:93GNRA
Not in a motif group
homologous
HL_5TBW_186
HL_42097.1
HL_6T83_1951/Ca/69:89No text annotation
Not in a motif group
HL_6T83_1961/Ca/108:114No text annotation
Not in a motif group
homologous
HL_5TBW_075
HL_87939.1
HL_6T83_1971/Ca/124:129No text annotation
Not in a motif group
homologous
HL_5TBW_076
HL_96851.2
HL_6T83_1981/a/7:17No text annotation
Not in a motif group
homologous
HL_4V88_186
HL_89881.2
HL_6T83_1991/a/70:81No text annotation
Not in a motif group
homologous
HL_4V88_187
HL_40069.1
HL_6T83_2001/a/154:160Other HL
Not in a motif group
homologous
HL_4V88_188
HL_76539.2
HL_6T83_2011/a/190:195No text annotation
Not in a motif group
homologous
HL_4V88_189
HL_77805.2
HL_6T83_2021/a/230:235UNCG
Not in a motif group
geometric
HL_5LYS_002
HL_03562.2
HL_6T83_2031/a/243:250T-loop with 1 bulged base
Not in a motif group
homologous
HL_4V88_191
HL_27930.1
HL_6T83_2041/a/276:279No text annotation
Not in a motif group
geometric
HL_4V88_192
HL_53837.1
HL_6T83_2051/a/330:338No text annotation
Not in a motif group
homologous
HL_4V88_193
HL_69023.2
HL_6T83_2061/a/368:373No text annotation
Not in a motif group
homologous
HL_4V88_194
HL_50142.2
HL_6T83_2071/a/393:404No text annotation
Not in a motif group
homologous
HL_4V88_195
HL_84288.1
HL_6T83_2081/a/414:419UNCG
Not in a motif group
homologous
HL_4V88_196
HL_03562.2
HL_6T83_2091/a/450:456No text annotation
Not in a motif group
homologous
HL_4V88_197
HL_09136.1
HL_6T83_2101/a/491:496No text annotation
Not in a motif group
homologous
HL_4V88_198
HL_56691.2
HL_6T83_2111/a/520:532No text annotation
Not in a motif group
geometric
HL_4V88_199
HL_06285.2
HL_6T83_2121/a/569:574Other HL
Not in a motif group
homologous
HL_4V88_200
HL_53845.1
HL_6T83_2131/a/713:725No text annotation
Not in a motif group
HL_6T83_2141/a/764:772No text annotation
Not in a motif group
homologous
HL_4V88_203
HL_46766.2
HL_6T83_2151/a/777:783No text annotation
Not in a motif group
homologous
HL_4V88_204
HL_97896.2
HL_6T83_2161/a/829:843No text annotation
Not in a motif group
homologous
HL_4V88_205
HL_96598.1
HL_6T83_2171/a/900:909No text annotation
Not in a motif group
homologous
HL_4V88_206
HL_12326.1
HL_6T83_2181/a/937:942Other HL
Not in a motif group
homologous
HL_4V88_207
HL_87030.2
HL_6T83_2191/a/997:1007No text annotation
Not in a motif group
homologous
HL_4V88_208
HL_12326.1
HL_6T83_2201/a/1055:1064No text annotation
Not in a motif group
HL_6T83_2211/a/1084:1089Other HL
Not in a motif group
homologous
HL_4V88_210
HL_42097.1
HL_6T83_2221/a/1121:1126GNRA
Not in a motif group
homologous
HL_4V88_211
HL_42097.1
HL_6T83_2231/a/1188:1197No text annotation
Not in a motif group
homologous
HL_4V88_212
HL_73530.2
HL_6T83_2241/a/1238:1247No text annotation
Not in a motif group
homologous
HL_4V88_213
HL_53597.2
HL_6T83_2251/a/1296:1301GNRA
Not in a motif group
homologous
HL_4V88_214
HL_42097.1
HL_6T83_2261/a/1309:1316No text annotation
Not in a motif group
homologous
HL_4V88_215
HL_71554.2
HL_6T83_2271/a/1359:1364No text annotation
Not in a motif group
homologous
HL_4V88_216
HL_10278.1
HL_6T83_2281/a/1396:1402No text annotation
Not in a motif group
homologous
HL_4V88_217
HL_42097.1
HL_6T83_2291/a/1501:1506GNRA
Not in a motif group
homologous
HL_4V88_218
HL_42097.1
HL_6T83_2301/a/1550:1561No text annotation
Not in a motif group
homologous
HL_4V88_219
HL_22554.1
HL_6T83_2311/a/1594:1602No text annotation
Not in a motif group
homologous
HL_4V88_220
HL_60812.1
HL_6T83_2331/a/1778:1783Other HL
Not in a motif group
homologous
HL_4V88_222
HL_16173.1

Problematic loops

#loop idProblemSequence
HL_6T83_044No text annotation
HL_6T83_052No text annotation
HL_6T83_088No text annotation
HL_6T83_107No text annotation
HL_6T83_149No text annotation
HL_6T83_154No text annotation
HL_6T83_164No text annotation
HL_6T83_172No text annotation
HL_6T83_232No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_6T83_0011/1b/3:4,
1/3b/155:156
No text annotation
Not in a motif group
IL_6T83_0021/1b/7:8,
1/3b/150:152
No text annotation
Not in a motif group
homologous
IL_8C3A_002
IL_61258.12
IL_6T83_0031/1b/13:15,
1/3b/144:145
No text annotation
Not in a motif group
homologous
IL_8C3A_003
IL_83039.13
IL_6T83_0041/1b/27:28,
1/1b/56:58
No text annotation
Not in a motif group
homologous
IL_8C3A_004
IL_76488.2
IL_6T83_0051/1b/31:38,
1/1b/45:53
tSH-tHW-tHH-tHS
Not in a motif group
geometric
IL_5TBW_005
IL_35728.2
IL_6T83_0061/1b/82:89,
1/1b/97:103
No text annotation
Not in a motif group
homologous
IL_5TBW_006
IL_88613.1
IL_6T83_0071/1b/123:124,
1/1b/144:149
No text annotation
Not in a motif group
geometric
IL_5TBW_007
IL_19724.2
IL_6T83_0081/1b/125:127,
1/1b/141:143
No text annotation
Not in a motif group
homologous
IL_8C3A_008
IL_95997.1
IL_6T83_0091/1b/164:167,
1/1b/255:257
Other IL
Not in a motif group
geometric
IL_5TBW_064
IL_84698.1
IL_6T83_0101/1b/169:170,
1/1b/248:253
No text annotation
Not in a motif group
homologous
IL_5TBW_010
IL_74684.1
IL_6T83_0111/1b/177:178,
1/1b/238:241
Major groove platform
Not in a motif group
geometric
IL_4WF9_026
IL_27635.1
IL_6T83_0121/1b/189:191,
1/1b/204:205
No text annotation
Not in a motif group
homologous
IL_8C3A_013
IL_83039.13
IL_6T83_0131/1b/337:339,
1/3b/25:26
No text annotation
Not in a motif group
homologous
IL_8C3A_014
IL_37497.2
IL_6T83_0141/1b/376:379,
1/1b/390:403
No text annotation
Not in a motif group
geometric
IL_5TBW_014
IL_60992.6
IL_6T83_0151/1b/404:410,
1/3b/13:19
Triple sheared with non-canonical cWW
Not in a motif group
homologous
IL_5TBW_015
IL_66414.6
IL_6T83_0161/1b/429:431,
1/1b/628:630
No text annotation
Not in a motif group
homologous
IL_5TBW_016
IL_51629.2
IL_6T83_0181/1b/512:513,
1/1b/577:579
No text annotation
Not in a motif group
homologous
IL_8C3A_020
IL_37497.2
IL_6T83_0191/1b/517:525,
1/1b/567:573
No text annotation
Not in a motif group
homologous
IL_5TBW_019
IL_23992.1
IL_6T83_0201/1b/531:538,
1/1b/553:561
No text annotation
Not in a motif group
homologous
IL_5TBW_020
IL_07703.1
IL_6T83_0211/1b/668:670,
1/1b/792:794
No text annotation
Not in a motif group
homologous
IL_5TBW_021
IL_95997.1
IL_6T83_0221/1b/680:684,
1/1b/696:700
No text annotation
Not in a motif group
homologous
IL_5TBW_022
IL_74284.1
IL_6T83_0231/1b/725:728,
1/1b/741:745
No text annotation
Not in a motif group
homologous
IL_8C3A_025
IL_07235.1
IL_6T83_0241/1b/752:753,
1/1b/779:781
Single bulged A
Not in a motif group
homologous
IL_5TBW_024
IL_37497.2
IL_6T83_0251/1b/755:756,
1/1b/775:777
Single bulged U
Not in a motif group
homologous
IL_5TBW_025
IL_83039.13
IL_6T83_0261/1b/758:763,
1/1b/768:773
No text annotation
Not in a motif group
homologous
IL_8C3A_028
IL_19954.2
IL_6T83_0271/1b/803:805,
1/1b/938:940
No text annotation
Not in a motif group
geometric
IL_7RQB_017
IL_95997.1
IL_6T83_0281/1b/805:809,
1/1b/931:938
No text annotation
Not in a motif group
homologous
IL_5TBW_028
IL_17470.6
IL_6T83_0291/1b/833:834,
1/1b/859:861
Single bulged G
Not in a motif group
geometric
IL_4WF9_023
IL_00225.2
IL_6T83_0301/1b/834:838,
1/1b/855:859
No text annotation
Not in a motif group
homologous
IL_8C3A_033
IL_56467.8
IL_6T83_0311/1b/869:872,
1/1b/888:890
Major groove platform with extra cWW
Not in a motif group
homologous
IL_5TBW_031
IL_05564.2
IL_6T83_0321/1b/873:875,
1/1b/886:887
No text annotation
Not in a motif group
homologous
IL_8C3A_035
IL_83039.13
IL_6T83_0331/1b/907:909,
1/1b/919:923
Multiple bulged bases
Not in a motif group
geometric
IL_5J7L_265
IL_90991.6
IL_6T83_0341/1b/954:956,
1/1b/965:967
No text annotation
Not in a motif group
homologous
IL_8C3A_037
IL_95997.1
IL_6T83_0351/1b/969:970,
1/1b/1111:1113
No text annotation
Not in a motif group
homologous
IL_8C3A_038
IL_76488.2
IL_6T83_0361/1b/977:982,
1/1b/1101:1104
No text annotation
Not in a motif group
IL_6T83_0371/1b/983:985,
1/1b/1099:1100
No text annotation
Not in a motif group
homologous
IL_8C3A_040
IL_00225.2
IL_6T83_0381/1b/991:997,
1/1b/1052:1058
7x7 Sarcin-Ricin with intercalated A; G-bulge
Not in a motif group
geometric
IL_5TBW_038
IL_93830.3
IL_6T83_0391/1b/997:998,
1/1b/1050:1052
Minor groove platform
Not in a motif group
homologous
IL_5TBW_039
IL_42622.2
IL_6T83_0401/1b/999:1004,
1/1b/1046:1049
C-loop
Not in a motif group
homologous
IL_5TBW_040
IL_02509.1
IL_6T83_0411/1b/1006:1009,
1/1b/1041:1044
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_5TBW_041
IL_30621.2
IL_6T83_0421/1b/1009:1011,
1/1b/1039:1041
No text annotation
Not in a motif group
homologous
IL_8C3A_045
IL_95997.1
IL_6T83_0431/1b/1014:1018,
1/1b/1034:1036
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_3TD0_002
IL_82068.2
IL_6T83_0441/1b/1069:1071,
1/1b/1087:1089
No text annotation
Not in a motif group
homologous
IL_8C3A_047
IL_95997.1
IL_6T83_0451/1b/1074:1076,
1/1b/1083:1084
No text annotation
Not in a motif group
homologous
IL_8C3A_048
IL_00225.2
IL_6T83_0461/1b/1120:1122,
1/1b/1136:1138
No text annotation
Not in a motif group
homologous
IL_5TBW_046
IL_95997.1
IL_6T83_0471/1b/1167:1171,
1/1b/1328:1332
UAA/GAN
Not in a motif group
homologous
IL_5TBW_048
IL_89002.2
IL_6T83_0481/1b/1173:1180,
1/1b/1325:1326
SSU/LSU pseudoknot
Not in a motif group
homologous
IL_5TBW_049
IL_15861.7
IL_6T83_0491/1b/1180:1182,
1/1b/1324:1325
Single bulged U
Not in a motif group
geometric
IL_5TBW_050
IL_83039.13
IL_6T83_0501/1b/1187:1194,
1/1b/1314:1319
No text annotation
Not in a motif group
geometric
IL_5TBW_051
IL_27086.1
IL_6T83_0511/1b/1194:1205,
1/1b/1299:1314
No text annotation
Not in a motif group
geometric
IL_5TBW_052
IL_53762.1
IL_6T83_0521/1b/1207:1209,
1/1b/1296:1297
No text annotation
Not in a motif group
homologous
IL_8C3A_056
IL_83039.13
IL_6T83_0531/1b/1218:1226,
1/1b/1283:1287
No text annotation
Not in a motif group
homologous
IL_8C3A_057
IL_90538.4
IL_6T83_0541/1b/1234:1238,
1/1b/1250:1254
No text annotation
Not in a motif group
IL_6T83_0551/1b/1262:1266,
1/1b/1275:1277
Major groove platform with extra cWW
Not in a motif group
geometric
IL_7A0S_019
IL_05564.2
IL_6T83_0561/1b/1376:1378,
1/1b/1428:1431
No text annotation
Not in a motif group
homologous
IL_8C3A_061
IL_52767.2
IL_6T83_0571/1b/1385:1387,
1/1b/1420:1421
No text annotation
Not in a motif group
homologous
IL_8C3A_062
IL_37497.2
IL_6T83_0581/1b/1388:1395,
1/1b/1415:1419
No text annotation
Not in a motif group
homologous
IL_8C3A_063
IL_70923.2
IL_6T83_0591/1b/1398:1400,
1/1b/1411:1412
Single bulged A
Not in a motif group
homologous
IL_5TBW_060
IL_37497.2
IL_6T83_0601/1b/1444:1450,
1/1b/2354:2359
No text annotation
Not in a motif group
homologous
IL_8C3A_065
IL_76042.2
IL_6T83_0611/1b/1500:1505,
1/1b/1513:1516
No text annotation
Not in a motif group
homologous
IL_8C3A_066
IL_93630.2
IL_6T83_0621/1b/1532:1536,
1/1b/1585:1590
No text annotation
Not in a motif group
homologous
IL_8C3A_067
IL_89002.2
IL_6T83_0631/1b/1618:1621,
1/1b/1824:1826
No text annotation
Not in a motif group
homologous
IL_8C3A_070
IL_84698.1
IL_6T83_0641/1b/1623:1625,
1/1b/1818:1822
No text annotation
Not in a motif group
homologous
IL_8C3A_071
IL_82068.2
IL_6T83_0651/1b/1627:1631,
1/1b/1811:1816
No text annotation
Not in a motif group
homologous
IL_5TBW_066
IL_48431.1
IL_6T83_0661/1b/1645:1649,
1/1b/1806:1810
No text annotation
Not in a motif group
homologous
IL_8C3A_073
IL_56467.8
IL_6T83_0671/1b/1661:1663,
1/1b/1786:1788
No text annotation
Not in a motif group
homologous
IL_8C3A_074
IL_95997.1
IL_6T83_0681/1b/1669:1670,
1/1b/1778:1780
Single bulged C
Not in a motif group
homologous
IL_5TBW_069
IL_61258.12
IL_6T83_0691/1b/1670:1671,
1/1b/1776:1778
Single stack bend
Not in a motif group
geometric
IL_5TBW_070
IL_76488.2
IL_6T83_0701/1b/1694:1698,
1/1b/1747:1752
No text annotation
Not in a motif group
homologous
IL_8C3A_077
IL_69313.1
IL_6T83_0711/1b/1702:1707,
1/1b/1737:1743
No text annotation
Not in a motif group
homologous
IL_5TBW_072
IL_39753.1
IL_6T83_0721/1b/1711:1717,
1/1b/1727:1733
Kink-turn
Not in a motif group
homologous
IL_5TBW_073
IL_60192.2
IL_6T83_0731/1b/1883:1889,
1/1b/2346:2349
No text annotation
Not in a motif group
homologous
IL_8C3A_080
IL_49460.2
IL_6T83_0741/1b/1895:1897,
1/1b/2338:2340
Isolated tWW turn
Not in a motif group
homologous
IL_5TBW_075
IL_54997.7
IL_6T83_0751/1b/1898:1901,
1/1b/2336:2337
Major groove platform; stack outside cWW
Not in a motif group
geometric
IL_5TBW_076
IL_50694.2
IL_6T83_0761/1b/1901:1906,
1/1b/2333:2336
No text annotation
Not in a motif group
homologous
IL_8C3A_083
IL_82842.2
IL_6T83_0771/1b/1918:1923,
1/1b/1928:1934
No text annotation
Not in a motif group
homologous
IL_8C3A_084
IL_65969.2
IL_6T83_0781/1b/1940:1942,
1/1b/2106:2108
No text annotation
Not in a motif group
homologous
IL_8C3A_085
IL_95997.1
IL_6T83_0791/1b/1947:1948,
1/1b/2098:2101
No text annotation
Not in a motif group
homologous
IL_8C3A_086
IL_74125.1
IL_6T83_0801/1b/2128:2129,
1/1b/2323:2325
No text annotation
Not in a motif group
homologous
IL_8C3A_087
IL_37497.2
IL_6T83_0811/1b/2156:2161,
1/1b/2173:2180
No text annotation
Not in a motif group
homologous
IL_8C3A_088
IL_64509.1
IL_6T83_0821/1b/2196:2199,
1/1b/2245:2246
No text annotation
Not in a motif group
homologous
IL_8C3A_089
IL_88739.1
IL_6T83_0831/1b/2200:2201,
1/1b/2241:2244
No text annotation
Not in a motif group
homologous
IL_8C3A_090
IL_16396.2
IL_6T83_0841/1b/2204:2206,
1/1b/2237:2238
No text annotation
Not in a motif group
homologous
IL_8C3A_091
IL_76488.2
IL_6T83_0851/1b/2206:2210,
1/1b/2235:2237
No text annotation
Not in a motif group
homologous
IL_8C3A_092
IL_65006.1
IL_6T83_0861/1b/2211:2217,
1/1b/2228:2234
No text annotation
Not in a motif group
homologous
IL_8C3A_093
IL_36973.6
IL_6T83_0871/1b/2276:2277,
1/1b/2307:2310
No text annotation
Not in a motif group
homologous
IL_8C3A_094
IL_59677.2
IL_6T83_0881/1b/2277:2288,
1/1b/2304:2307
No text annotation
Not in a motif group
geometric
IL_5TBW_090
IL_81589.2
IL_6T83_0891/1b/2391:2394,
1/1b/2986:2988
No text annotation
Not in a motif group
homologous
IL_8C3A_096
IL_63450.2
IL_6T83_0901/1b/2396:2398,
1/1b/2981:2984
Minor groove platform with intercalation
Not in a motif group
homologous
IL_5TBW_092
IL_54678.5
IL_6T83_0911/1b/2409:2411,
1/1b/2811:2812
No text annotation
Not in a motif group
homologous
IL_8C3A_098
IL_83039.13
IL_6T83_0921/1b/2412:2413,
1/1b/2807:2810
No text annotation
Not in a motif group
homologous
IL_8C3A_099
IL_42622.2
IL_6T83_0931/1b/2423:2425,
1/1b/2604:2607
No text annotation
Not in a motif group
homologous
IL_8C3A_100
IL_38958.7
IL_6T83_0941/1b/2444:2445,
1/1b/2501:2503
Single stack bend
Not in a motif group
geometric
IL_5TBW_035
IL_76488.2
IL_6T83_0951/1b/2520:2526,
1/1b/2584:2587
No text annotation
Not in a motif group
homologous
IL_8C3A_106
IL_74114.1
IL_6T83_0961/1b/2614:2615,
1/1b/2625:2627
No text annotation
Not in a motif group
homologous
IL_8C3A_107
IL_69996.1
IL_6T83_0971/1b/2666:2668,
1/1b/2686:2690
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_5TBW_099
IL_38958.7
IL_6T83_0981/1b/2718:2721,
1/1b/2735:2738
No text annotation
Not in a motif group
homologous
IL_8C3A_109
IL_30621.2
IL_6T83_0991/1b/2770:2773,
1/1b/2787:2788
No text annotation
Not in a motif group
homologous
IL_8C3A_110
IL_76488.2
IL_6T83_1001/1b/2823:2824,
1/1b/2865:2867
Major groove platform
Not in a motif group
geometric
IL_5TBW_102
IL_27635.1
IL_6T83_1011/1b/2824:2826,
1/1b/2863:2865
No text annotation
Not in a motif group
geometric
IL_5TBW_103
IL_95997.1
IL_6T83_1021/1b/2826:2828,
1/1b/2862:2863
Major groove platform
Not in a motif group
geometric
IL_5TBW_104
IL_76223.2
IL_6T83_1031/1b/2828:2831,
1/1b/2857:2862
No text annotation
Not in a motif group
IL_6T83_1041/1b/2835:2839,
1/1b/2849:2853
Triple sheared
Not in a motif group
homologous
IL_5TBW_106
IL_56467.8
IL_6T83_1051/1b/2876:2877,
1/1b/2949:2951
Major groove platform
Not in a motif group
homologous
IL_5TBW_107
IL_76223.2
IL_6T83_1061/1b/2879:2881,
1/1b/2943:2947
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_5TBW_108
IL_90933.2
IL_6T83_1071/1b/2881:2882,
1/1b/2940:2943
No text annotation
Not in a motif group
homologous
IL_8C3A_117
IL_71530.2
IL_6T83_1081/1b/2889:2891,
1/1b/2912:2914
No text annotation
Not in a motif group
geometric
IL_3GM7_005
IL_95997.1
IL_6T83_1091/1b/2891:2892,
1/1b/2909:2912
Minor groove platform with intercalation
Not in a motif group
homologous
IL_5TBW_111
IL_95601.3
IL_6T83_1101/1b/2918:2920,
1/1b/2926:2928
No text annotation
Not in a motif group
geometric
IL_5TBW_112
IL_95997.1
IL_6T83_1111/1b/2960:2961,
1/1b/2970:2972
Single bulged A
Not in a motif group
geometric
IL_1U9S_001
IL_37497.2
IL_6T83_1121/1b/3004:3007,
1/1b/3139:3144
No text annotation
Not in a motif group
homologous
IL_8C3A_123
IL_09705.9
IL_6T83_1131/1b/3012:3014,
1/1b/3040:3042
No text annotation
Not in a motif group
homologous
IL_8C3A_124
IL_95997.1
IL_6T83_1141/1b/3018:3025,
1/1b/3030:3036
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
geometric
IL_5TBW_116
IL_04346.7
IL_6T83_1151/1b/3047:3051,
1/1b/3091:3094
No text annotation
Not in a motif group
homologous
IL_8C3A_126
IL_37712.2
IL_6T83_1161/1b/3054:3059,
1/1b/3084:3088
No text annotation
Not in a motif group
homologous
IL_8C3A_127
IL_17136.1
IL_6T83_1171/1b/3063:3064,
1/1b/3077:3080
No text annotation
Not in a motif group
homologous
IL_8C3A_128
IL_71530.2
IL_6T83_1181/1b/3103:3107,
1/1b/3127:3131
No text annotation
Not in a motif group
homologous
IL_8C3A_129
IL_89002.2
IL_6T83_1191/1b/3164:3166,
1/1b/3284:3286
No text annotation
Not in a motif group
homologous
IL_8C3A_130
IL_95997.1
IL_6T83_1201/1b/3168:3170,
1/1b/3280:3282
No text annotation
Not in a motif group
homologous
IL_5TBW_122
IL_95997.1
IL_6T83_1211/1b/3177:3179,
1/1b/3210:3211
Single bulged A
Not in a motif group
homologous
IL_5TBW_123
IL_37497.2
IL_6T83_1221/1b/3179:3188,
1/1b/3204:3210
No text annotation
Not in a motif group
geometric
IL_5TBW_124
IL_15174.1
IL_6T83_1231/1b/3193:3194,
1/1b/3197:3199
Single bulged U
Not in a motif group
homologous
IL_5TBW_125
IL_83039.13
IL_6T83_1241/1b/3225:3229,
1/1b/3258:3260
No text annotation
Not in a motif group
homologous
IL_8C3A_133
IL_19389.6
IL_6T83_1251/1b/3233:3235,
1/1b/3252:3254
No text annotation
Not in a motif group
homologous
IL_5TBW_127
IL_95997.1
IL_6T83_1261/1b/3235:3238,
1/1b/3249:3252
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_6MWN_005
IL_30621.2
IL_6T83_1271/1b/3300:3303,
1/1b/3311:3314
No text annotation
Not in a motif group
homologous
IL_8C3A_135
IL_30621.2
IL_6T83_1281/1b/3318:3320,
1/1b/3387:3388
Single bulged U
Not in a motif group
homologous
IL_5TBW_130
IL_83039.13
IL_6T83_1291/1b/3324:3326,
1/1b/3380:3383
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_5ML7_010
IL_82068.2
IL_6T83_1301/1b/3328:3330,
1/1b/3373:3378
No text annotation
Not in a motif group
homologous
IL_8C3A_138
IL_90933.2
IL_6T83_1311/1b/3331:3337,
1/1b/3367:3372
No text annotation
Not in a motif group
IL_6T83_1321/1b/3340:3342,
1/1b/3363:3364
No text annotation
Not in a motif group
homologous
IL_8C3A_140
IL_83039.13
IL_6T83_1331/1b/3342:3345,
1/1b/3360:3363
Double sheared
Not in a motif group
geometric
IL_4V9F_100
IL_09705.9
IL_6T83_1341/1b/3349:3350,
1/1b/3353:3356
No text annotation
Not in a motif group
homologous
IL_8C3A_142
IL_59677.2
IL_6T83_1351/2b/24:26,
1/2b/600:601
Single bulged C
Not in a motif group
homologous
IL_4V88_384
IL_61258.12
IL_6T83_1361/2b/35:37,
1/2b/471:473
UC cWW
Not in a motif group
homologous
IL_4V88_385
IL_51629.2
IL_6T83_1371/2b/37:41,
1/2b/466:471
No text annotation
Not in a motif group
geometric
IL_4V88_386
IL_41507.1
IL_6T83_1381/2b/42:48,
1/2b/431:433
No text annotation
Not in a motif group
homologous
IL_4V88_387
IL_33912.1
IL_6T83_1391/2b/50:52,
1/2b/428:429
Minor groove platform
Not in a motif group
homologous
IL_4V88_388
IL_93353.1
IL_6T83_1401/2b/58:63,
1/2b/87:89
No text annotation
Not in a motif group
homologous
IL_4V88_389
IL_95004.1
IL_6T83_1411/2b/64:69,
1/2b/82:86
No text annotation
Not in a motif group
homologous
IL_4V88_390
IL_77691.1
IL_6T83_1421/2b/109:112,
1/2b/302:305
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_391
IL_30621.2
IL_6T83_1431/2b/113:116,
1/2b/300:301
Multiple bulged bases
Not in a motif group
homologous
IL_4V88_392
IL_44546.1
IL_6T83_1441/2b/117:122,
1/2b/295:299
No text annotation
Not in a motif group
homologous
IL_4V88_393
IL_64181.2
IL_6T83_1451/2b/143:149,
1/2b/165:172
tWH-tWH-tHW-tHW
Not in a motif group
homologous
IL_4V88_394
IL_80604.2
IL_6T83_1461/2b/150:152,
1/2b/162:164
Isolated cWH basepair
Not in a motif group
geometric
IL_2H1M_003
IL_51629.2
IL_6T83_1471/2b/186:189,
1/2b/196:199
Double sheared
Not in a motif group
homologous
IL_4V88_396
IL_09705.9
IL_6T83_1481/2b/204:206,
1/2b/259:263
Major groove platform with extra cWW
Not in a motif group
geometric
IL_7RQB_022
IL_05564.2
IL_6T83_1491/2b/206:208,
1/2b/257:259
No text annotation
Not in a motif group
homologous
IL_4V88_398
IL_95997.1
IL_6T83_1501/2b/265:267,
1/2b/288:289
Single bulged A
Not in a motif group
homologous
IL_4V88_399
IL_37497.2
IL_6T83_1511/2b/270:273,
1/2b/283:285
No text annotation
Not in a motif group
homologous
IL_4V88_400
IL_47298.1
IL_6T83_1521/2b/275:276,
1/2b/279:281
Single bulged U
Not in a motif group
homologous
IL_4V88_401
IL_83039.13
IL_6T83_1531/2b/311:316,
1/2b/348:355
Kink-turn with non-sequential stacking
Not in a motif group
homologous
IL_4V88_402
IL_45067.2
IL_6T83_1541/2b/318:323,
1/2b/345:346
No text annotation
Not in a motif group
homologous
IL_4V88_403
IL_48100.2
IL_6T83_1551/2b/363:365,
1/2b/376:381
No text annotation
Not in a motif group
IL_6T83_1561/2b/389:391,
1/2b/406:408
Isolated cWH basepair
Not in a motif group
homologous
IL_4V88_405
IL_51629.2
IL_6T83_1571/2b/411:413,
1/2b/420:422
Isolated near basepair
Not in a motif group
homologous
IL_4V88_406
IL_52767.2
IL_6T83_1581/2b/439:441,
1/2b/463:464
Single bulged U
Not in a motif group
homologous
IL_4V88_407
IL_83039.13
IL_6T83_1591/2b/443:447,
1/2b/460:461
C-loop
Not in a motif group
geometric
IL_4LFB_015
IL_75255.1
IL_6T83_1601/2b/447:448,
1/2b/458:460
Single bulged G
Not in a motif group
geometric
IL_5J7L_019
IL_00225.2
IL_6T83_1611/2b/481:482,
1/2b/505:507
Single bulged A
Not in a motif group
homologous
IL_4V88_409
IL_37497.2
IL_6T83_1621/2b/514:516,
1/2b/536:543
No text annotation
Not in a motif group
IL_6T83_1631/2b/517:518,
1/2b/533:535
Minor groove platform
Not in a motif group
geometric
IL_4V88_388
IL_93353.1
IL_6T83_1641/2b/518:520,
1/2b/532:533
Minor groove platform
Not in a motif group
geometric
IL_4V88_412
IL_93353.1
IL_6T83_1651/2b/550:557,
1/2b/587:588
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
geometric
IL_1NBS_009
IL_69996.1
IL_6T83_1661/2b/557:559,
1/2b/586:587
Single bulged U
Not in a motif group
homologous
IL_4V88_414
IL_83039.13
IL_6T83_1671/2b/562:568,
1/2b/575:583
No text annotation
Not in a motif group
homologous
IL_4V88_415
IL_55871.1
IL_6T83_1681/2b/616:622,
1/2b/1104:1105
No text annotation
Not in a motif group
homologous
IL_4V88_416
IL_69996.1
IL_6T83_1691/2b/624:626,
1/2b/973:975
No text annotation
Not in a motif group
homologous
IL_4V88_417
IL_95997.1
IL_6T83_1701/2b/627:632,
1/2b/967:972
No text annotation
Not in a motif group
IL_6T83_1711/2b/646:648,
1/2b/686:688
No text annotation
Not in a motif group
homologous
IL_4V88_419
IL_95997.1
IL_6T83_1721/2b/650:658,
1/2b/676:684
No text annotation
Not in a motif group
IL_6T83_1731/2b/745:747,
1/2b/802:806
No text annotation
Not in a motif group
IL_6T83_1741/2b/748:750,
1/2b/799:801
No text annotation
Not in a motif group
homologous
IL_4V88_424
IL_95997.1
IL_6T83_1751/2b/751:759,
1/2b/791:798
No text annotation
Not in a motif group
homologous
IL_4V88_425
IL_69091.1
IL_6T83_1761/2b/817:822,
1/2b/850:854
No text annotation
Not in a motif group
IL_6T83_1771/2b/865:866,
1/2b/962:965
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_4V88_428
IL_50694.2
IL_6T83_1781/2b/868:870,
1/2b/957:960
No text annotation
Not in a motif group
geometric
IL_1YZ9_001
IL_95997.1
IL_6T83_1791/2b/871:874,
1/2b/953:956
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_430
IL_30621.2
IL_6T83_1801/2b/874:878,
1/2b/950:953
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4V88_431
IL_30621.2
IL_6T83_1811/2b/885:888,
1/2b/924:927
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_432
IL_30621.2
IL_6T83_1821/2b/893:895,
1/2b/917:919
No text annotation
Not in a motif group
geometric
IL_4P43_001
IL_95997.1
IL_6T83_1831/2b/895:899,
1/2b/910:917
Kink-turn
Not in a motif group
geometric
IL_7A0S_004
IL_45067.2
IL_6T83_1841/2b/985:990,
1/2b/1014:1016
Other IL
Not in a motif group
geometric
IL_4V88_435
IL_22046.1
IL_6T83_1851/2b/990:994,
1/2b/1010:1014
tSH-tHW-tHS
Not in a motif group
homologous
IL_4V88_436
IL_17136.1
IL_6T83_1861/2b/1034:1036,
1/2b/1095:1101
No text annotation
Not in a motif group
homologous
IL_4V88_437
IL_19557.3
IL_6T83_1871/2b/1041:1044,
1/2b/1074:1077
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_438
IL_30621.2
IL_6T83_1881/2b/1051:1053,
1/2b/1066:1067
Single bulged U
Not in a motif group
homologous
IL_4V88_439
IL_83039.13
IL_6T83_1891/2b/1111:1118,
1/2b/1129:1134
8x6 Sarcin-Ricin with inserted Y; G-bulge
Not in a motif group
homologous
IL_4V88_440
IL_24606.2
IL_6T83_1901/2b/1146:1147,
1/2b/1630:1632
Single bulged A
Not in a motif group
homologous
IL_4V88_441
IL_37497.2
IL_6T83_1911/2b/1149:1151,
1/2b/1627:1628
Single bulged G
Not in a motif group
homologous
IL_4V88_442
IL_00225.2
IL_6T83_1921/2b/1157:1160,
1/2b/1617:1621
C-loop
Not in a motif group
homologous
IL_4V88_443
IL_63596.6
IL_6T83_1931/2b/1173:1175,
1/2b/1464:1466
No text annotation
Not in a motif group
homologous
IL_4V88_444
IL_95997.1
IL_6T83_1941/2b/1178:1179,
1/2b/1459:1461
Minor groove platform
Not in a motif group
homologous
IL_4V88_445
IL_42622.2
IL_6T83_1951/2b/1213:1215,
1/2b/1448:1450
UU cWW
Not in a motif group
geometric
IL_3SZX_003
IL_95997.1
IL_6T83_1961/2b/1224:1230,
1/2b/1257:1259
No text annotation
Not in a motif group
IL_6T83_1971/2b/1230:1233,
1/2b/1252:1257
No text annotation
Not in a motif group
IL_6T83_1981/2b/1234:1236,
1/2b/1249:1251
No text annotation
Not in a motif group
homologous
IL_4V88_448
IL_10023.1
IL_6T83_1991/2b/1268:1270,
1/2b/1440:1441
Single bulged U
Not in a motif group
homologous
IL_4V88_449
IL_83039.13
IL_6T83_2001/2b/1271:1276,
1/2b/1436:1439
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4V88_473
IL_30621.2
IL_6T83_2011/2b/1276:1278,
1/2b/1430:1436
Minor groove platform with extra cWW
Not in a motif group
geometric
IL_4V88_451
IL_92788.2
IL_6T83_2021/2b/1280:1281,
1/2b/1426:1428
Single bulged A
Not in a motif group
homologous
IL_4V88_452
IL_37497.2
IL_6T83_2031/2b/1290:1292,
1/2b/1323:1325
Isolated cWH basepair
Not in a motif group
homologous
IL_4V88_453
IL_51629.2
IL_6T83_2041/2b/1306:1308,
1/2b/1317:1318
Minor groove platform
Not in a motif group
geometric
IL_4V88_454
IL_93353.1
IL_6T83_2051/2b/1335:1337,
1/2b/1415:1416
Single stack bend
Not in a motif group
geometric
IL_7A0S_054
IL_76488.2
IL_6T83_2061/2b/1339:1342,
1/2b/1383:1385
No text annotation
Not in a motif group
homologous
IL_4V88_455
IL_10023.1
IL_6T83_2071/2b/1345:1348,
1/2b/1377:1380
Minor groove platform
Not in a motif group
homologous
IL_4V88_456
IL_76458.1
IL_6T83_2081/2b/1352:1354,
1/2b/1369:1373
No text annotation
Not in a motif group
homologous
IL_4V88_457
IL_95997.1
IL_6T83_2091/2b/1389:1391,
1/2b/1407:1412
Major groove platform; stack outside cWW
Not in a motif group
geometric
IL_4V88_458
IL_58032.1
IL_6T83_2101/2b/1480:1487,
1/2b/1519:1527
No text annotation
Not in a motif group
homologous
IL_4V88_459
IL_10447.1
IL_6T83_2111/2b/1488:1494,
1/2b/1513:1518
No text annotation
Not in a motif group
homologous
IL_4V88_460
IL_75461.4
IL_6T83_2121/2b/1495:1498,
1/2b/1509:1512
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_461
IL_30621.2
IL_6T83_2131/2b/1540:1545,
1/2b/1566:1571
No text annotation
Not in a motif group
homologous
IL_4V88_462
IL_19954.2
IL_6T83_2141/2b/1636:1638,
1/2b/1764:1767
No text annotation
Not in a motif group
homologous
IL_4V88_463
IL_36143.3
IL_6T83_2151/2b/1638:1641,
1/2b/1760:1764
No text annotation
Not in a motif group
geometric
IL_4V88_464
IL_99670.1
IL_6T83_2161/2b/1642:1644,
1/2b/1757:1759
No text annotation
Not in a motif group
geometric
IL_4V88_465
IL_95997.1
IL_6T83_2171/2b/1644:1647,
1/2b/1753:1757
No text annotation
Not in a motif group
geometric
IL_1DUQ_001
IL_67743.1
IL_6T83_2181/2b/1650:1652,
1/2b/1748:1750
AA cWW
Not in a motif group
homologous
IL_4V88_467
IL_95997.1
IL_6T83_2191/2b/1653:1656,
1/2b/1744:1747
Double sheared
Not in a motif group
geometric
IL_4V88_468
IL_09705.9
IL_6T83_2201/2b/1656:1658,
1/2b/1743:1744
Single bulged U
Not in a motif group
homologous
IL_4V88_469
IL_83039.13
IL_6T83_2211/2b/1665:1667,
1/2b/1734:1736
No text annotation
Not in a motif group
homologous
IL_4V88_470
IL_51629.2
IL_6T83_2221/2b/1669:1672,
1/2b/1729:1732
Double sheared
Not in a motif group
homologous
IL_4V88_471
IL_09705.9
IL_6T83_2231/2b/1672:1674,
1/2b/1727:1729
No text annotation
Not in a motif group
geometric
IL_5TBW_068
IL_95997.1
IL_6T83_2241/2b/1675:1678,
1/2b/1723:1726
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_473
IL_30621.2
IL_6T83_2251/2b/1678:1682,
1/2b/1719:1723
Triple sheared
Not in a motif group
geometric
IL_7RQB_075
IL_56467.8
IL_6T83_2281/3b/64:66,
1/3b/93:96
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_5TBW_145
IL_82068.2
IL_6T83_2291/3b/68:69,
1/3b/89:91
Single bulged U
Not in a motif group
geometric
IL_5TBW_146
IL_83039.13
IL_6T83_2301/4b/15:16,
1/4b/63:65
Single bulged A
Not in a motif group
homologous
IL_5TBW_372
IL_37497.2
IL_6T83_2311/4b/21:27,
1/4b/53:58
No text annotation
Not in a motif group
homologous
IL_5TBW_373
IL_10207.2
IL_6T83_2321/4b/28:29,
1/4b/49:52
Minor groove platform
Not in a motif group
geometric
IL_5TBW_374
IL_63797.2
IL_6T83_2331/4b/29:30,
1/4b/47:49
Single stack bend
Not in a motif group
homologous
IL_5TBW_375
IL_76488.2
IL_6T83_2341/4b/32:36,
1/4b/41:45
Symmetric double minor groove platform
Not in a motif group
geometric
IL_5TBW_376
IL_58103.6
IL_6T83_2351/4b/72:80,
1/4b/100:106
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_5TBW_377
IL_04346.7
IL_6T83_2361/4b/84:87,
1/4b/94:96
No text annotation
Not in a motif group
homologous
IL_5TBW_378
IL_95997.1
IL_6T83_2371/Aa/3:4,
1/Ca/155:156
No text annotation
Not in a motif group
IL_6T83_2381/Aa/7:8,
1/Ca/150:152
No text annotation
Not in a motif group
homologous
IL_8C3A_002
IL_61258.12
IL_6T83_2391/Aa/13:15,
1/Ca/144:145
No text annotation
Not in a motif group
homologous
IL_8C3A_003
IL_83039.13
IL_6T83_2401/Aa/27:28,
1/Aa/56:58
No text annotation
Not in a motif group
homologous
IL_8C3A_004
IL_76488.2
IL_6T83_2411/Aa/31:38,
1/Aa/45:53
tSH-tHW-tHH-tHS
Not in a motif group
geometric
IL_5TBW_005
IL_35728.2
IL_6T83_2421/Aa/82:89,
1/Aa/97:103
No text annotation
Not in a motif group
homologous
IL_8C3A_006
IL_88613.1
IL_6T83_2431/Aa/123:124,
1/Aa/144:149
No text annotation
Not in a motif group
homologous
IL_5TBW_007
IL_19724.2
IL_6T83_2441/Aa/125:127,
1/Aa/141:143
No text annotation
Not in a motif group
homologous
IL_8C3A_008
IL_95997.1
IL_6T83_2451/Aa/163:165,
1/Aa/257:258
Single stack bend
Not in a motif group
homologous
IL_5TBW_009
IL_76488.2
IL_6T83_2461/Aa/169:171,
1/Aa/247:253
No text annotation
Not in a motif group
IL_6T83_2471/Aa/177:178,
1/Aa/238:241
No text annotation
Not in a motif group
IL_6T83_2481/Aa/189:191,
1/Aa/204:205
Single bulged U
Not in a motif group
homologous
IL_5TBW_012
IL_83039.13
IL_6T83_2491/Aa/337:339,
1/Ca/25:26
Single bulged A
Not in a motif group
homologous
IL_5TBW_013
IL_37497.2
IL_6T83_2501/Aa/376:379,
1/Aa/390:403
No text annotation
Not in a motif group
homologous
IL_5TBW_014
IL_60992.6
IL_6T83_2511/Aa/404:410,
1/Ca/13:19
Triple sheared with non-canonical cWW
Not in a motif group
homologous
IL_5TBW_015
IL_66414.6
IL_6T83_2521/Aa/429:431,
1/Aa/628:630
No text annotation
Not in a motif group
homologous
IL_5TBW_016
IL_51629.2
IL_6T83_2541/Aa/512:513,
1/Aa/577:579
Single bulged A
Not in a motif group
homologous
IL_5TBW_018
IL_37497.2
IL_6T83_2551/Aa/517:525,
1/Aa/567:573
No text annotation
Not in a motif group
IL_6T83_2561/Aa/531:538,
1/Aa/553:561
No text annotation
Not in a motif group
homologous
IL_5TBW_020
IL_07703.1
IL_6T83_2571/Aa/667:670,
1/Aa/792:795
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4K27_001
IL_30621.2
IL_6T83_2581/Aa/680:684,
1/Aa/696:700
No text annotation
Not in a motif group
homologous
IL_5TBW_022
IL_74284.1
IL_6T83_2591/Aa/725:728,
1/Aa/741:745
UAA/GAN
Not in a motif group
homologous
IL_5TBW_023
IL_07235.1
IL_6T83_2601/Aa/752:753,
1/Aa/779:781
No text annotation
Not in a motif group
homologous
IL_8C3A_026
IL_37497.2
IL_6T83_2611/Aa/755:756,
1/Aa/775:777
No text annotation
Not in a motif group
homologous
IL_8C3A_027
IL_83039.13
IL_6T83_2621/Aa/758:763,
1/Aa/768:773
No text annotation
Not in a motif group
geometric
IL_5TBW_026
IL_19954.2
IL_6T83_2631/Aa/803:805,
1/Aa/938:940
No text annotation
Not in a motif group
homologous
IL_5TBW_027
IL_95997.1
IL_6T83_2641/Aa/805:809,
1/Aa/931:938
No text annotation
Not in a motif group
geometric
IL_5TBW_028
IL_17470.6
IL_6T83_2651/Aa/828:829,
1/Aa/895:897
No text annotation
Not in a motif group
homologous
IL_8C3A_031
IL_37497.2
IL_6T83_2661/Aa/833:834,
1/Aa/859:861
No text annotation
Not in a motif group
homologous
IL_8C3A_032
IL_00225.2
IL_6T83_2671/Aa/834:839,
1/Aa/854:859
Triple sheared with non-canonical cWW
Not in a motif group
geometric
IL_7A0S_018
IL_86929.2
IL_6T83_2681/Aa/869:872,
1/Aa/888:890
No text annotation
Not in a motif group
homologous
IL_8C3A_034
IL_05564.2
IL_6T83_2691/Aa/873:875,
1/Aa/886:887
No text annotation
Not in a motif group
homologous
IL_8C3A_035
IL_83039.13
IL_6T83_2701/Aa/907:909,
1/Aa/919:923
No text annotation
Not in a motif group
homologous
IL_8C3A_036
IL_90991.6
IL_6T83_2711/Aa/954:956,
1/Aa/965:967
No text annotation
Not in a motif group
homologous
IL_8C3A_037
IL_95997.1
IL_6T83_2721/Aa/969:970,
1/Aa/1111:1113
No text annotation
Not in a motif group
homologous
IL_8C3A_038
IL_76488.2
IL_6T83_2731/Aa/977:982,
1/Aa/1101:1104
No text annotation
Not in a motif group
homologous
IL_8C3A_039
IL_59027.1
IL_6T83_2741/Aa/983:985,
1/Aa/1099:1100
No text annotation
Not in a motif group
homologous
IL_8C3A_040
IL_00225.2
IL_6T83_2751/Aa/991:997,
1/Aa/1052:1058
7x7 Sarcin-Ricin with intercalated A; G-bulge
Not in a motif group
homologous
IL_5TBW_038
IL_93830.3
IL_6T83_2761/Aa/997:998,
1/Aa/1050:1052
Minor groove platform
Not in a motif group
geometric
IL_6DLR_003
IL_42622.2
IL_6T83_2771/Aa/999:1004,
1/Aa/1046:1049
C-loop
Not in a motif group
homologous
IL_5TBW_040
IL_02509.1
IL_6T83_2781/Aa/1006:1009,
1/Aa/1041:1044
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_5TBW_041
IL_30621.2
IL_6T83_2791/Aa/1009:1011,
1/Aa/1039:1041
No text annotation
Not in a motif group
homologous
IL_5TBW_042
IL_95997.1
IL_6T83_2801/Aa/1014:1018,
1/Aa/1034:1036
Decoding loop related
Not in a motif group
geometric
IL_3C3Z_002
IL_64417.1
IL_6T83_2811/Aa/1069:1071,
1/Aa/1087:1089
No text annotation
Not in a motif group
homologous
IL_8C3A_047
IL_95997.1
IL_6T83_2821/Aa/1072:1076,
1/Aa/1083:1086
No text annotation
Not in a motif group
IL_6T83_2831/Aa/1120:1122,
1/Aa/1136:1138
No text annotation
Not in a motif group
homologous
IL_8C3A_049
IL_95997.1
IL_6T83_2841/Aa/1167:1171,
1/Aa/1328:1332
UAA/GAN
Not in a motif group
homologous
IL_5TBW_048
IL_89002.2
IL_6T83_2851/Aa/1173:1180,
1/Aa/1325:1326
SSU/LSU pseudoknot
Not in a motif group
homologous
IL_5TBW_049
IL_15861.7
IL_6T83_2861/Aa/1180:1182,
1/Aa/1324:1325
Single bulged U
Not in a motif group
geometric
IL_5TBW_050
IL_83039.13
IL_6T83_2871/Aa/1187:1194,
1/Aa/1314:1319
No text annotation
Not in a motif group
homologous
IL_5TBW_051
IL_27086.1
IL_6T83_2881/Aa/1194:1205,
1/Aa/1299:1314
No text annotation
Not in a motif group
geometric
IL_5TBW_052
IL_53762.1
IL_6T83_2891/Aa/1207:1209,
1/Aa/1296:1297
Single bulged U
Not in a motif group
homologous
IL_5TBW_053
IL_83039.13
IL_6T83_2901/Aa/1218:1226,
1/Aa/1283:1287
No text annotation
Not in a motif group
homologous
IL_8C3A_057
IL_90538.4
IL_6T83_2911/Aa/1234:1238,
1/Aa/1250:1254
No text annotation
Not in a motif group
homologous
IL_8C3A_058
IL_30542.3
IL_6T83_2921/Aa/1262:1266,
1/Aa/1275:1277
Major groove platform with extra cWW
Not in a motif group
geometric
IL_5D8H_003
IL_05564.2
IL_6T83_2931/Aa/1376:1378,
1/Aa/1428:1431
No text annotation
Not in a motif group
homologous
IL_8C3A_061
IL_52767.2
IL_6T83_2941/Aa/1385:1387,
1/Aa/1420:1421
No text annotation
Not in a motif group
homologous
IL_8C3A_062
IL_37497.2
IL_6T83_2951/Aa/1388:1395,
1/Aa/1415:1419
No text annotation
Not in a motif group
homologous
IL_8C3A_063
IL_70923.2
IL_6T83_2961/Aa/1398:1400,
1/Aa/1411:1412
Single bulged A
Not in a motif group
homologous
IL_5TBW_060
IL_37497.2
IL_6T83_2971/Aa/1444:1450,
1/Aa/2354:2359
7x6 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_5TBW_061
IL_76042.2
IL_6T83_2981/Aa/1492:1495,
1/Aa/1835:1836
Major groove platform; stack outside cWW
Not in a motif group
geometric
IL_7A0S_046
IL_50694.2
IL_6T83_2991/Aa/1500:1505,
1/Aa/1513:1516
No text annotation
Not in a motif group
homologous
IL_8C3A_066
IL_93630.2
IL_6T83_3001/Aa/1532:1536,
1/Aa/1585:1590
No text annotation
Not in a motif group
homologous
IL_8C3A_067
IL_89002.2
IL_6T83_3011/Aa/1618:1621,
1/Aa/1824:1826
No text annotation
Not in a motif group
homologous
IL_8C3A_070
IL_84698.1
IL_6T83_3021/Aa/1623:1624,
1/Aa/1819:1822
Major groove intercalation
Not in a motif group
geometric
IL_5J7L_352
IL_16396.2
IL_6T83_3031/Aa/1627:1631,
1/Aa/1811:1816
No text annotation
Not in a motif group
homologous
IL_8C3A_072
IL_48431.1
IL_6T83_3041/Aa/1645:1649,
1/Aa/1806:1810
No text annotation
Not in a motif group
homologous
IL_8C3A_073
IL_56467.8
IL_6T83_3051/Aa/1661:1663,
1/Aa/1786:1788
No text annotation
Not in a motif group
homologous
IL_8C3A_074
IL_95997.1
IL_6T83_3061/Aa/1669:1670,
1/Aa/1778:1780
Single bulged C
Not in a motif group
geometric
IL_5TBW_069
IL_61258.12
IL_6T83_3071/Aa/1670:1671,
1/Aa/1776:1778
No text annotation
Not in a motif group
homologous
IL_8C3A_076
IL_76488.2
IL_6T83_3081/Aa/1694:1698,
1/Aa/1747:1752
No text annotation
Not in a motif group
homologous
IL_8C3A_077
IL_69313.1
IL_6T83_3091/Aa/1702:1707,
1/Aa/1737:1743
No text annotation
Not in a motif group
homologous
IL_8C3A_078
IL_39753.1
IL_6T83_3101/Aa/1711:1717,
1/Aa/1727:1733
Kink-turn
Not in a motif group
homologous
IL_5TBW_073
IL_60192.2
IL_6T83_3111/Aa/1883:1889,
1/Aa/2346:2349
No text annotation
Not in a motif group
homologous
IL_8C3A_080
IL_49460.2
IL_6T83_3121/Aa/1895:1897,
1/Aa/2338:2340
No text annotation
Not in a motif group
homologous
IL_8C3A_081
IL_54997.7
IL_6T83_3131/Aa/1898:1901,
1/Aa/2336:2337
Major groove platform; stack outside cWW
Not in a motif group
geometric
IL_5TBW_076
IL_50694.2
IL_6T83_3141/Aa/1901:1906,
1/Aa/2333:2336
No text annotation
Not in a motif group
homologous
IL_8C3A_083
IL_82842.2
IL_6T83_3151/Aa/1918:1923,
1/Aa/1928:1934
No text annotation
Not in a motif group
homologous
IL_8C3A_084
IL_65969.2
IL_6T83_3161/Aa/1940:1942,
1/Aa/2106:2108
No text annotation
Not in a motif group
homologous
IL_8C3A_085
IL_95997.1
IL_6T83_3171/Aa/1947:1948,
1/Aa/2098:2101
No text annotation
Not in a motif group
homologous
IL_8C3A_086
IL_74125.1
IL_6T83_3181/Aa/2128:2129,
1/Aa/2323:2325
Single bulged A
Not in a motif group
homologous
IL_5TBW_082
IL_37497.2
IL_6T83_3191/Aa/2156:2161,
1/Aa/2173:2180
No text annotation
Not in a motif group
homologous
IL_8C3A_088
IL_64509.1
IL_6T83_3201/Aa/2196:2199,
1/Aa/2245:2246
No text annotation
Not in a motif group
homologous
IL_8C3A_089
IL_88739.1
IL_6T83_3211/Aa/2200:2201,
1/Aa/2241:2244
No text annotation
Not in a motif group
homologous
IL_8C3A_090
IL_16396.2
IL_6T83_3221/Aa/2204:2210,
1/Aa/2235:2238
No text annotation
Not in a motif group
IL_6T83_3231/Aa/2211:2217,
1/Aa/2228:2234
No text annotation
Not in a motif group
homologous
IL_5TBW_088
IL_36973.6
IL_6T83_3241/Aa/2276:2277,
1/Aa/2307:2310
Multiple bulged bases
Not in a motif group
geometric
IL_5TBW_089
IL_59677.2
IL_6T83_3251/Aa/2277:2288,
1/Aa/2304:2307
No text annotation
Not in a motif group
homologous
IL_8C3A_095
IL_81589.2
IL_6T83_3261/Aa/2391:2394,
1/Aa/2986:2988
No text annotation
Not in a motif group
homologous
IL_8C3A_096
IL_63450.2
IL_6T83_3271/Aa/2396:2398,
1/Aa/2981:2984
No text annotation
Not in a motif group
homologous
IL_8C3A_097
IL_54678.5
IL_6T83_3281/Aa/2409:2411,
1/Aa/2811:2812
No text annotation
Not in a motif group
homologous
IL_8C3A_098
IL_83039.13
IL_6T83_3291/Aa/2412:2413,
1/Aa/2807:2810
Minor groove platform
Not in a motif group
homologous
IL_5TBW_094
IL_42622.2
IL_6T83_3301/Aa/2423:2425,
1/Aa/2604:2607
No text annotation
Not in a motif group
homologous
IL_8C3A_100
IL_38958.7
IL_6T83_3311/Aa/2520:2526,
1/Aa/2584:2587
No text annotation
Not in a motif group
homologous
IL_8C3A_106
IL_74114.1
IL_6T83_3321/Aa/2614:2615,
1/Aa/2625:2627
No text annotation
Not in a motif group
homologous
IL_8C3A_107
IL_69996.1
IL_6T83_3331/Aa/2666:2668,
1/Aa/2686:2690
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_5TBW_099
IL_38958.7
IL_6T83_3341/Aa/2714:2716,
1/Aa/2740:2741
Single bulged A
Not in a motif group
geometric
IL_4V88_399
IL_37497.2
IL_6T83_3351/Aa/2718:2721,
1/Aa/2735:2738
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_5TBW_100
IL_30621.2
IL_6T83_3361/Aa/2770:2773,
1/Aa/2787:2788
No text annotation
Not in a motif group
homologous
IL_8C3A_110
IL_76488.2
IL_6T83_3371/Aa/2823:2824,
1/Aa/2865:2867
Major groove platform
Not in a motif group
geometric
IL_5TBW_102
IL_27635.1
IL_6T83_3381/Aa/2824:2826,
1/Aa/2863:2865
No text annotation
Not in a motif group
homologous
IL_5TBW_103
IL_95997.1
IL_6T83_3391/Aa/2826:2828,
1/Aa/2862:2863
Major groove platform
Not in a motif group
geometric
IL_5TBW_104
IL_76223.2
IL_6T83_3401/Aa/2828:2831,
1/Aa/2857:2862
No text annotation
Not in a motif group
IL_6T83_3411/Aa/2835:2839,
1/Aa/2849:2853
No text annotation
Not in a motif group
homologous
IL_8C3A_114
NA
IL_6T83_3421/Aa/2876:2877,
1/Aa/2949:2951
No text annotation
Not in a motif group
homologous
IL_8C3A_115
IL_76223.2
IL_6T83_3431/Aa/2879:2882,
1/Aa/2940:2947
No text annotation
Not in a motif group
IL_6T83_3441/Aa/2889:2891,
1/Aa/2912:2914
CC cWW
Not in a motif group
geometric
IL_4KNQ_002
IL_95997.1
IL_6T83_3451/Aa/2891:2892,
1/Aa/2909:2912
No text annotation
Not in a motif group
homologous
IL_8C3A_119
IL_95601.3
IL_6T83_3461/Aa/2918:2920,
1/Aa/2926:2928
No text annotation
Not in a motif group
homologous
IL_8C3A_120
IL_95997.1
IL_6T83_3471/Aa/2960:2961,
1/Aa/2970:2972
Single bulged A
Not in a motif group
geometric
IL_7RQB_101
IL_37497.2
IL_6T83_3481/Aa/3004:3007,
1/Aa/3139:3144
No text annotation
Not in a motif group
homologous
IL_8C3A_123
IL_09705.9
IL_6T83_3491/Aa/3012:3014,
1/Aa/3040:3042
No text annotation
Not in a motif group
homologous
IL_8C3A_124
IL_95997.1
IL_6T83_3501/Aa/3018:3025,
1/Aa/3030:3036
No text annotation
Not in a motif group
homologous
IL_8C3A_125
IL_04346.7
IL_6T83_3511/Aa/3047:3051,
1/Aa/3091:3094
No text annotation
Not in a motif group
homologous
IL_8C3A_126
IL_37712.2
IL_6T83_3521/Aa/3054:3059,
1/Aa/3084:3088
No text annotation
Not in a motif group
homologous
IL_8C3A_127
IL_17136.1
IL_6T83_3531/Aa/3063:3064,
1/Aa/3077:3080
No text annotation
Not in a motif group
homologous
IL_8C3A_128
IL_71530.2
IL_6T83_3541/Aa/3103:3107,
1/Aa/3127:3131
UAA/GAN
Not in a motif group
homologous
IL_5TBW_120
IL_89002.2
IL_6T83_3551/Aa/3164:3166,
1/Aa/3284:3286
No text annotation
Not in a motif group
homologous
IL_8C3A_130
IL_95997.1
IL_6T83_3561/Aa/3168:3170,
1/Aa/3280:3282
No text annotation
Not in a motif group
homologous
IL_5TBW_122
IL_95997.1
IL_6T83_3571/Aa/3177:3179,
1/Aa/3210:3211
Single bulged A
Not in a motif group
homologous
IL_5TBW_123
IL_37497.2
IL_6T83_3581/Aa/3179:3188,
1/Aa/3204:3210
No text annotation
Not in a motif group
geometric
IL_5TBW_124
IL_15174.1
IL_6T83_3591/Aa/3193:3194,
1/Aa/3197:3199
Single bulged U
Not in a motif group
homologous
IL_5TBW_125
IL_83039.13
IL_6T83_3601/Aa/3225:3229,
1/Aa/3258:3260
No text annotation
Not in a motif group
homologous
IL_8C3A_133
IL_19389.6
IL_6T83_3611/Aa/3233:3235,
1/Aa/3252:3254
No text annotation
Not in a motif group
geometric
IL_4M4O_002
IL_95997.1
IL_6T83_3621/Aa/3235:3238,
1/Aa/3249:3252
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_5TBW_128
IL_30621.2
IL_6T83_3631/Aa/3300:3303,
1/Aa/3311:3314
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_5TBW_129
IL_30621.2
IL_6T83_3641/Aa/3318:3320,
1/Aa/3387:3388
Single bulged U
Not in a motif group
geometric
IL_5J7L_298
IL_83039.13
IL_6T83_3651/Aa/3324:3325,
1/Aa/3381:3383
Single bulged U
Not in a motif group
homologous
IL_5TBW_131
IL_83039.13
IL_6T83_3661/Aa/3328:3330,
1/Aa/3373:3378
No text annotation
Not in a motif group
homologous
IL_8C3A_138
IL_90933.2
IL_6T83_3671/Aa/3332:3337,
1/Aa/3367:3371
No text annotation
Not in a motif group
homologous
IL_8C3A_139
IL_83162.5
IL_6T83_3681/Aa/3340:3342,
1/Aa/3363:3364
No text annotation
Not in a motif group
IL_6T83_3691/Aa/3342:3345,
1/Aa/3360:3363
No text annotation
Not in a motif group
homologous
IL_8C3A_141
IL_09705.9
IL_6T83_3701/Aa/3349:3350,
1/Aa/3353:3356
No text annotation
Not in a motif group
homologous
IL_8C3A_142
IL_59677.2
IL_6T83_3711/Bb/15:16,
1/Bb/63:65
Single bulged A
Not in a motif group
homologous
IL_5TBW_372
IL_37497.2
IL_6T83_3721/Bb/21:27,
1/Bb/53:58
No text annotation
Not in a motif group
homologous
IL_5TBW_373
IL_10207.2
IL_6T83_3731/Bb/28:29,
1/Bb/49:52
Minor groove platform
Not in a motif group
geometric
IL_5TBW_374
IL_63797.2
IL_6T83_3741/Bb/29:30,
1/Bb/47:49
Single stack bend
Not in a motif group
homologous
IL_5TBW_375
IL_76488.2
IL_6T83_3751/Bb/32:36,
1/Bb/41:45
Symmetric double minor groove platform
Not in a motif group
homologous
IL_7RQB_114
IL_58103.6
IL_6T83_3761/Bb/72:80,
1/Bb/100:106
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_5TBW_377
IL_04346.7
IL_6T83_3771/Bb/84:87,
1/Bb/94:96
No text annotation
Not in a motif group
homologous
IL_5TBW_378
IL_95997.1
IL_6T83_3781/Ca/44:64,
1/Ca/96:100
No text annotation
Not in a motif group
geometric
IL_5TBW_144
IL_44998.1
IL_6T83_3791/Ca/64:66,
1/Ca/93:96
Isolated non-canonical cWW with bulges
Not in a motif group
geometric
IL_5TBW_145
IL_82068.2
IL_6T83_3801/Ca/68:69,
1/Ca/89:91
Single bulged U
Not in a motif group
homologous
IL_5TBW_146
IL_83039.13
IL_6T83_3811/a/24:26,
1/a/600:601
Single bulged C
Not in a motif group
homologous
IL_4V88_384
IL_61258.12
IL_6T83_3821/a/35:37,
1/a/471:473
UC cWW
Not in a motif group
geometric
IL_4V88_385
IL_51629.2
IL_6T83_3831/a/37:41,
1/a/466:471
No text annotation
Not in a motif group
homologous
IL_4V88_386
IL_41507.1
IL_6T83_3841/a/42:48,
1/a/431:433
No text annotation
Not in a motif group
homologous
IL_4V88_387
IL_33912.1
IL_6T83_3851/a/50:52,
1/a/428:429
Minor groove platform
Not in a motif group
homologous
IL_4V88_388
IL_93353.1
IL_6T83_3861/a/58:63,
1/a/87:89
No text annotation
Not in a motif group
homologous
IL_4V88_389
IL_95004.1
IL_6T83_3871/a/64:69,
1/a/82:86
No text annotation
Not in a motif group
homologous
IL_8C3A_398
IL_77691.1
IL_6T83_3881/a/109:112,
1/a/302:305
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_391
IL_30621.2
IL_6T83_3891/a/113:116,
1/a/300:301
Multiple bulged bases
Not in a motif group
homologous
IL_4V88_392
IL_44546.1
IL_6T83_3901/a/117:122,
1/a/295:299
No text annotation
Not in a motif group
homologous
IL_4V88_393
IL_64181.2
IL_6T83_3911/a/144:149,
1/a/165:171
No text annotation
Not in a motif group
IL_6T83_3921/a/150:152,
1/a/162:164
Isolated cWH basepair
Not in a motif group
geometric
IL_5F5F_003
IL_51629.2
IL_6T83_3931/a/186:189,
1/a/196:199
Double sheared
Not in a motif group
homologous
IL_4V88_396
IL_09705.9
IL_6T83_3941/a/204:206,
1/a/259:263
Major groove platform with extra cWW
Not in a motif group
homologous
IL_4V88_397
IL_05564.2
IL_6T83_3951/a/206:208,
1/a/257:259
No text annotation
Not in a motif group
geometric
IL_5TBW_115
IL_95997.1
IL_6T83_3961/a/265:267,
1/a/288:289
Single bulged A
Not in a motif group
homologous
IL_4V88_399
IL_37497.2
IL_6T83_3971/a/270:273,
1/a/283:285
No text annotation
Not in a motif group
homologous
IL_4V88_400
IL_47298.1
IL_6T83_3981/a/275:276,
1/a/279:281
Single bulged U
Not in a motif group
homologous
IL_4V88_401
IL_83039.13
IL_6T83_3991/a/311:316,
1/a/348:355
Kink-turn with non-sequential stacking
Not in a motif group
homologous
IL_4V88_402
IL_45067.2
IL_6T83_4001/a/318:323,
1/a/345:346
No text annotation
Not in a motif group
homologous
IL_4V88_403
IL_48100.2
IL_6T83_4011/a/363:365,
1/a/376:381
No text annotation
Not in a motif group
homologous
IL_4V88_404
IL_11347.1
IL_6T83_4021/a/389:391,
1/a/406:408
Isolated cWH basepair
Not in a motif group
homologous
IL_4V88_405
IL_51629.2
IL_6T83_4031/a/411:413,
1/a/420:422
Isolated near basepair
Not in a motif group
homologous
IL_4V88_406
IL_52767.2
IL_6T83_4041/a/439:441,
1/a/463:464
Single bulged U
Not in a motif group
homologous
IL_4V88_407
IL_83039.13
IL_6T83_4051/a/443:447,
1/a/460:461
C-loop
Not in a motif group
geometric
IL_5J7L_018
IL_75255.1
IL_6T83_4061/a/447:448,
1/a/458:460
Single bulged G
Not in a motif group
geometric
IL_5J7L_019
IL_00225.2
IL_6T83_4071/a/480:483,
1/a/504:508
No text annotation
Not in a motif group
IL_6T83_4081/a/517:518,
1/a/533:535
Minor groove platform
Not in a motif group
geometric
IL_4V88_412
IL_93353.1
IL_6T83_4091/a/518:520,
1/a/532:533
Minor groove platform
Not in a motif group
geometric
IL_4V88_388
IL_93353.1
IL_6T83_4101/a/550:557,
1/a/587:588
SSU/LSU pseudoknot
Not in a motif group
geometric
IL_4V88_413
IL_15861.7
IL_6T83_4111/a/557:559,
1/a/586:587
Single bulged U
Not in a motif group
homologous
IL_4V88_414
IL_83039.13
IL_6T83_4121/a/562:568,
1/a/575:583
No text annotation
Not in a motif group
homologous
IL_8C3A_425
IL_55871.1
IL_6T83_4131/a/616:622,
1/a/1104:1105
No text annotation
Not in a motif group
homologous
IL_4V88_416
IL_69996.1
IL_6T83_4141/a/624:626,
1/a/973:975
No text annotation
Not in a motif group
homologous
IL_4V88_417
IL_95997.1
IL_6T83_4151/a/627:631,
1/a/968:972
tSH-tHW-tHS
Not in a motif group
homologous
IL_4V88_418
IL_17136.1
IL_6T83_4161/a/646:648,
1/a/686:688
No text annotation
Not in a motif group
homologous
IL_4V88_419
IL_95997.1
IL_6T83_4171/a/652:658,
1/a/676:682
No text annotation
Not in a motif group
IL_6T83_4181/a/746:747,
1/a/802:805
Major groove minor groove platform; mini C-loop
Not in a motif group
homologous
IL_4V88_423
IL_09061.6
IL_6T83_4191/a/748:750,
1/a/799:801
No text annotation
Not in a motif group
homologous
IL_4V88_424
IL_95997.1
IL_6T83_4201/a/751:760,
1/a/790:798
No text annotation
Not in a motif group
IL_6T83_4211/a/817:822,
1/a/850:854
No text annotation
Not in a motif group
IL_6T83_4221/a/865:866,
1/a/962:965
Major groove platform; stack outside cWW
Not in a motif group
geometric
IL_6N5P_003
IL_50694.2
IL_6T83_4231/a/867:870,
1/a/957:961
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_429
IL_30621.2
IL_6T83_4241/a/871:874,
1/a/953:956
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_430
IL_30621.2
IL_6T83_4251/a/874:878,
1/a/950:953
Tandem non-canonical cWW pairs
Not in a motif group
geometric
IL_4V88_431
IL_30621.2
IL_6T83_4261/a/885:888,
1/a/924:927
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_432
IL_30621.2
IL_6T83_4271/a/893:899,
1/a/910:919
No text annotation
Not in a motif group
homologous
IL_8C3A_440
IL_22252.1
IL_6T83_4281/a/985:990,
1/a/1014:1016
Other IL
Not in a motif group
homologous
IL_4V88_435
IL_22046.1
IL_6T83_4291/a/990:994,
1/a/1010:1014
tSH-tHW-tHS
Not in a motif group
geometric
IL_4LFB_033
IL_17136.1
IL_6T83_4301/a/1041:1044,
1/a/1074:1077
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_438
IL_30621.2
IL_6T83_4311/a/1051:1053,
1/a/1066:1067
Single bulged U
Not in a motif group
homologous
IL_4V88_439
IL_83039.13
IL_6T83_4321/a/1111:1118,
1/a/1129:1134
8x6 Sarcin-Ricin with inserted Y; G-bulge
Not in a motif group
homologous
IL_4V88_440
IL_24606.2
IL_6T83_4331/a/1146:1147,
1/a/1630:1632
Single bulged A
Not in a motif group
homologous
IL_4V88_441
IL_37497.2
IL_6T83_4341/a/1149:1151,
1/a/1627:1628
Single bulged G
Not in a motif group
homologous
IL_4V88_442
IL_00225.2
IL_6T83_4351/a/1157:1160,
1/a/1617:1621
C-loop
Not in a motif group
geometric
IL_1KOG_007
IL_75255.1
IL_6T83_4361/a/1173:1175,
1/a/1464:1466
No text annotation
Not in a motif group
homologous
IL_4V88_444
IL_95997.1
IL_6T83_4371/a/1178:1179,
1/a/1459:1461
Minor groove platform
Not in a motif group
homologous
IL_4V88_445
IL_42622.2
IL_6T83_4381/a/1213:1215,
1/a/1448:1450
No text annotation
Not in a motif group
homologous
IL_4V88_446
IL_95997.1
IL_6T83_4391/a/1224:1233,
1/a/1252:1259
No text annotation
Not in a motif group
IL_6T83_4401/a/1234:1236,
1/a/1249:1251
No text annotation
Not in a motif group
homologous
IL_4V88_448
IL_10023.1
IL_6T83_4411/a/1268:1270,
1/a/1440:1441
Single bulged U
Not in a motif group
homologous
IL_4V88_449
IL_83039.13
IL_6T83_4421/a/1272:1276,
1/a/1436:1438
Isolated cWS basepair
Not in a motif group
homologous
IL_4V88_450
IL_76319.2
IL_6T83_4431/a/1276:1279,
1/a/1429:1436
Minor groove platform related
Not in a motif group
geometric
IL_5J7L_010
IL_58764.3
IL_6T83_4441/a/1280:1281,
1/a/1426:1428
Single bulged A
Not in a motif group
homologous
IL_4V88_452
IL_37497.2
IL_6T83_4451/a/1290:1292,
1/a/1323:1325
Isolated cWH basepair
Not in a motif group
homologous
IL_4V88_453
IL_51629.2
IL_6T83_4461/a/1306:1308,
1/a/1317:1318
Minor groove platform
Not in a motif group
geometric
IL_4V88_454
IL_93353.1
IL_6T83_4471/a/1339:1342,
1/a/1383:1385
No text annotation
Not in a motif group
homologous
IL_4V88_455
IL_10023.1
IL_6T83_4481/a/1345:1348,
1/a/1377:1380
Minor groove platform
Not in a motif group
homologous
IL_4V88_456
IL_76458.1
IL_6T83_4491/a/1352:1354,
1/a/1369:1373
No text annotation
Not in a motif group
homologous
IL_4V88_457
IL_95997.1
IL_6T83_4501/a/1389:1391,
1/a/1407:1412
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_4V88_458
IL_58032.1
IL_6T83_4511/a/1480:1487,
1/a/1519:1527
No text annotation
Not in a motif group
homologous
IL_4V88_459
IL_10447.1
IL_6T83_4521/a/1488:1494,
1/a/1513:1518
No text annotation
Not in a motif group
homologous
IL_4V88_460
IL_75461.4
IL_6T83_4531/a/1495:1498,
1/a/1509:1512
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_461
IL_30621.2
IL_6T83_4541/a/1540:1545,
1/a/1566:1571
No text annotation
Not in a motif group
geometric
IL_4V88_462
IL_19954.2
IL_6T83_4551/a/1636:1638,
1/a/1764:1767
No text annotation
Not in a motif group
homologous
IL_4V88_463
IL_36143.3
IL_6T83_4561/a/1638:1641,
1/a/1760:1764
No text annotation
Not in a motif group
geometric
IL_4V88_464
IL_99670.1
IL_6T83_4571/a/1642:1644,
1/a/1757:1759
No text annotation
Not in a motif group
homologous
IL_4V88_465
IL_95997.1
IL_6T83_4581/a/1644:1647,
1/a/1753:1757
No text annotation
Not in a motif group
IL_6T83_4591/a/1650:1652,
1/a/1748:1750
AA cWW
Not in a motif group
homologous
IL_4V88_467
IL_95997.1
IL_6T83_4601/a/1653:1656,
1/a/1744:1747
Double sheared
Not in a motif group
homologous
IL_4V88_468
IL_09705.9
IL_6T83_4611/a/1656:1658,
1/a/1743:1744
Single bulged U
Not in a motif group
geometric
IL_4V88_469
IL_83039.13
IL_6T83_4621/a/1665:1667,
1/a/1734:1736
No text annotation
Not in a motif group
homologous
IL_4V88_470
IL_51629.2
IL_6T83_4631/a/1669:1672,
1/a/1729:1732
Double sheared
Not in a motif group
geometric
IL_4V88_471
IL_09705.9
IL_6T83_4641/a/1672:1674,
1/a/1727:1729
No text annotation
Not in a motif group
homologous
IL_4V88_472
IL_95997.1
IL_6T83_4651/a/1675:1678,
1/a/1723:1726
Tandem non-canonical cWW pairs
Not in a motif group
homologous
IL_4V88_473
IL_30621.2
IL_6T83_4661/a/1678:1682,
1/a/1719:1723
Triple sheared
Not in a motif group
geometric
IL_4V88_474
IL_56467.8

Problematic loops

#loop idProblemSequence
IL_6T83_017No text annotation
IL_6T83_226Other IL
IL_6T83_227No text annotation
IL_6T83_253No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_6T83_0011/1b/113:123,
1/1b/149:158,
1/1b/263:267
No text annotation
Not in a motif group
J3_6T83_0021/1b/369:376,
1/1b/403:404,
1/3b/19:20
No text annotation
Not in a motif group
homologous
J3_5TBW_002
NA
J3_6T83_0031/1b/502:503,
1/1b/588:597,
1/1b/606:611
No text annotation
Not in a motif group
homologous
J3_5TBW_003
NA
J3_6T83_0041/1b/814:820,
1/1b/905:907,
1/1b/923:926
No text annotation
Not in a motif group
homologous
J3_8C3A_003
NA
J3_6T83_0051/1b/828:831,
1/1b/863:867,
1/1b/892:897
No text annotation
Not in a motif group
homologous
J3_5TBW_005
NA
J3_6T83_0061/1b/986:987,
1/1b/1062:1066,
1/1b/1092:1098
No text annotation
Not in a motif group
homologous
J3_5TBW_006
NA
J3_6T83_0071/1b/1230:1232,
1/1b/1256:1262,
1/1b/1277:1279
No text annotation
Not in a motif group
homologous
J3_8C3A_005
NA
J3_6T83_0081/1b/1479:1485,
1/1b/1857:1859,
1/1b/1871:1874
No text annotation
Not in a motif group
homologous
J3_8C3A_006
NA
J3_6T83_0091/1b/1488:1492,
1/1b/1836:1843,
1/1b/1852:1854
No text annotation
Not in a motif group
J3_6T83_0101/1b/1526:1531,
1/1b/1591:1595,
1/1b/1612:1613
No text annotation
Not in a motif group
homologous
J3_5TBW_010
NA
J3_6T83_0111/1b/1631:1632,
1/1b/1641:1645,
1/1b/1810:1811
No text annotation
Not in a motif group
J3_6T83_0121/1b/2432:2435,
1/1b/2512:2517,
1/1b/2590:2597
No text annotation
Not in a motif group
homologous
J3_8C3A_008
NA
J3_6T83_0131/1b/2529:2532,
1/1b/2547:2563,
1/1b/2578:2581
No text annotation
Not in a motif group
J3_6T83_0141/1b/2651:2653,
1/1b/2754:2765,
1/1b/2793:2798
No text annotation
Not in a motif group
J3_6T83_0151/1b/2664:2666,
1/1b/2690:2692,
1/1b/2701:2706
No text annotation
Not in a motif group
homologous
J3_8C3A_010
NA
J3_6T83_0161/1b/2886:2889,
1/1b/2914:2916,
1/1b/2930:2936
No text annotation
Not in a motif group
homologous
J3_5TBW_014
NA
J3_6T83_0171/1b/3298:3300,
1/1b/3314:3318,
1/1b/3388:3390
No text annotation
Not in a motif group
homologous
J3_5TBW_015
NA
J3_6T83_0181/2b/41:42,
1/2b/433:439,
1/2b/464:466
No text annotation
Not in a motif group
J3_6T83_0191/2b/633:635,
1/2b/861:865,
1/2b/965:966
No text annotation
Not in a motif group
J3_6T83_0201/2b/760:763,
1/2b/773:775,
1/2b/785:790
No text annotation
Not in a motif group
homologous
J3_4V88_032
NA
J3_6T83_0211/2b/881:884,
1/2b/928:936,
1/2b/943:947
No text annotation
Not in a motif group
homologous
J3_4V88_033
NA
J3_6T83_0221/2b/1037:1039,
1/2b/1079:1083,
1/2b/1090:1094
No text annotation
Not in a motif group
homologous
J3_4V88_034
NA
J3_6T83_0231/2b/1161:1164,
1/2b/1581:1587,
1/2b/1609:1616
No text annotation
Not in a motif group
homologous
J3_4V88_035
NA
J3_6T83_0241/2b/1168:1171,
1/2b/1468:1470,
1/2b/1574:1577
No text annotation
Not in a motif group
homologous
J3_8C3A_039
NA
J3_6T83_0251/2b/1180:1187,
1/2b/1198:1209,
1/2b/1454:1458
No text annotation
Not in a motif group
J3_6T83_0261/2b/1215:1220,
1/2b/1263:1267,
1/2b/1442:1448
No text annotation
Not in a motif group
homologous
J3_4V88_038
NA
J3_6T83_0271/2b/1283:1288,
1/2b/1327:1332,
1/2b/1419:1424
No text annotation
Not in a motif group
J3_6T83_0281/2b/1293:1295,
1/2b/1302:1306,
1/2b/1318:1322
No text annotation
Not in a motif group
J3_6T83_0291/2b/1337:1338,
1/2b/1386:1389,
1/2b/1412:1415
No text annotation
Not in a motif group
J3_6T83_0301/2b/1470:1474,
1/2b/1533:1540,
1/2b/1571:1574
No text annotation
Not in a motif group
J3_6T83_0311/3b/44:45,
1/3b/58:64,
1/3b/96:100
No text annotation
Not in a motif group
J3_6T83_0321/4b/9:14,
1/4b/66:67,
1/4b/111:112
No text annotation
Not in a motif group
homologous
J3_5TBW_045
NA
J3_6T83_0331/Aa/113:123,
1/Aa/149:158,
1/Aa/263:267
No text annotation
Not in a motif group
J3_6T83_0341/Aa/368:376,
1/Aa/403:404,
1/Ca/19:21
No text annotation
Not in a motif group
J3_6T83_0351/Aa/502:503,
1/Aa/588:597,
1/Aa/606:611
No text annotation
Not in a motif group
homologous
J3_5TBW_003
NA
J3_6T83_0361/Aa/661:663,
1/Aa/799:802,
1/Aa/941:942
No text annotation
Not in a motif group
J3_6T83_0371/Aa/814:820,
1/Aa/905:907,
1/Aa/923:926
No text annotation
Not in a motif group
homologous
J3_8C3A_003
NA
J3_6T83_0381/Aa/829:831,
1/Aa/863:867,
1/Aa/892:895
No text annotation
Not in a motif group
homologous
J3_8C3A_004
NA
J3_6T83_0391/Aa/986:987,
1/Aa/1062:1066,
1/Aa/1092:1098
No text annotation
Not in a motif group
J3_6T83_0401/Aa/1230:1232,
1/Aa/1256:1262,
1/Aa/1277:1279
No text annotation
Not in a motif group
homologous
J3_5TBW_007
NA
J3_6T83_0411/Aa/1479:1485,
1/Aa/1857:1859,
1/Aa/1871:1874
No text annotation
Not in a motif group
homologous
J3_5TBW_008
NA
J3_6T83_0421/Aa/1488:1491,
1/Aa/1837:1843,
1/Aa/1852:1854
No text annotation
Not in a motif group
homologous
J3_8C3A_007
NA
J3_6T83_0431/Aa/1526:1531,
1/Aa/1591:1595,
1/Aa/1612:1613
No text annotation
Not in a motif group
homologous
J3_5TBW_010
NA
J3_6T83_0441/Aa/1631:1632,
1/Aa/1641:1645,
1/Aa/1810:1811
No text annotation
Not in a motif group
J3_6T83_0451/Aa/2432:2435,
1/Aa/2512:2517,
1/Aa/2590:2597
No text annotation
Not in a motif group
homologous
J3_5TBW_012
NA
J3_6T83_0461/Aa/2529:2532,
1/Aa/2547:2563,
1/Aa/2578:2581
No text annotation
Not in a motif group
J3_6T83_0471/Aa/2664:2666,
1/Aa/2690:2692,
1/Aa/2701:2706
No text annotation
Not in a motif group
homologous
J3_5TBW_013
NA
J3_6T83_0481/Aa/2886:2889,
1/Aa/2914:2916,
1/Aa/2930:2936
No text annotation
Not in a motif group
homologous
J3_8C3A_011
NA
J3_6T83_0491/Aa/3298:3300,
1/Aa/3314:3318,
1/Aa/3388:3390
No text annotation
Not in a motif group
homologous
J3_5TBW_015
NA
J3_6T83_0501/Bb/9:14,
1/Bb/66:68,
1/Bb/110:112
No text annotation
Not in a motif group
J3_6T83_0511/a/41:42,
1/a/433:439,
1/a/464:466
No text annotation
Not in a motif group
J3_6T83_0521/a/633:635,
1/a/861:865,
1/a/965:966
No text annotation
Not in a motif group
J3_6T83_0531/a/760:763,
1/a/773:775,
1/a/785:790
No text annotation
Not in a motif group
homologous
J3_4V88_032
NA
J3_6T83_0541/a/881:884,
1/a/928:936,
1/a/943:947
No text annotation
Not in a motif group
homologous
J3_4V88_033
NA
J3_6T83_0551/a/1034:1039,
1/a/1079:1083,
1/a/1090:1101
No text annotation
Not in a motif group
J3_6T83_0561/a/1161:1164,
1/a/1581:1587,
1/a/1609:1616
No text annotation
Not in a motif group
homologous
J3_4V88_035
NA
J3_6T83_0571/a/1168:1171,
1/a/1468:1470,
1/a/1574:1577
No text annotation
Not in a motif group
homologous
J3_8C3A_039
NA
J3_6T83_0581/a/1180:1187,
1/a/1198:1209,
1/a/1454:1458
No text annotation
Not in a motif group
J3_6T83_0591/a/1215:1220,
1/a/1263:1267,
1/a/1442:1448
No text annotation
Not in a motif group
homologous
J3_8C3A_041
NA
J3_6T83_0601/a/1283:1288,
1/a/1327:1333,
1/a/1418:1424
No text annotation
Not in a motif group
J3_6T83_0611/a/1293:1294,
1/a/1303:1306,
1/a/1318:1322
No text annotation
Not in a motif group
J3_6T83_0621/a/1336:1338,
1/a/1386:1389,
1/a/1412:1415
No text annotation
Not in a motif group
homologous
J3_8C3A_043
NA
J3_6T83_0631/a/1470:1474,
1/a/1533:1540,
1/a/1571:1574
No text annotation
Not in a motif group
homologous
J3_4V88_041
NA

Problematic loops

No problematic loops


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