6N1D Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6N1D_001 | 1/A16S/12:22 | No text annotation Not in a motif group | homologous HL_5J7L_001 HL_89881.2 | |
| HL_6N1D_002 | 1/A16S/78:91 | No text annotation Not in a motif group | ||
| HL_6N1D_003 | 1/A16S/158:163 | GNRA Not in a motif group | homologous HL_4LFB_003 HL_42097.1 | |
| HL_6N1D_004 | 1/A16S/186F:186K | No text annotation Not in a motif group | homologous HL_4LFB_004 HL_10278.1 | |
| HL_6N1D_005 | 1/A16S/201:216 | No text annotation Not in a motif group | ||
| HL_6N1D_006 | 1/A16S/259:267 | No text annotation Not in a motif group | homologous HL_4LFB_006 HL_69023.2 | |
| HL_6N1D_007 | 1/A16S/296:301 | GNRA Not in a motif group | homologous HL_5J7L_007 HL_42097.1 | |
| HL_6N1D_008 | 1/A16S/320:333 | No text annotation Not in a motif group | homologous HL_6CZR_079 HL_81205.2 | |
| HL_6N1D_009 | 1/A16S/342:347 | No text annotation Not in a motif group | homologous HL_6CZR_080 HL_03562.2 | |
| HL_6N1D_010 | 1/A16S/379:384 | GNRA Not in a motif group | homologous HL_5J7L_010 HL_42097.1 | |
| HL_6N1D_011 | 1/A16S/419:424 | UNCG Not in a motif group | homologous HL_4LFB_011 HL_03562.2 | |
| HL_6N1D_012 | 1/A16S/458:474 | No text annotation Not in a motif group | homologous HL_4LFB_012 HL_43656.2 | |
| HL_6N1D_013 | 1/A16S/522:527 | No text annotation Not in a motif group | geometric HL_4YAZ_004 HL_56691.2 | |
| HL_6N1D_014 | 1/A16S/617:623 | No text annotation Not in a motif group | homologous HL_5J7L_014 HL_26881.1 | |
| HL_6N1D_015 | 1/A16S/689:698 | No text annotation Not in a motif group | homologous HL_5J7L_015 HL_12326.1 | |
| HL_6N1D_016 | 1/A16S/726:731 | Other HL Not in a motif group | homologous HL_5J7L_016 HL_87030.2 | |
| HL_6N1D_017 | 1/A16S/786:796 | No text annotation Not in a motif group | homologous HL_4LFB_017 HL_12326.1 | |
| HL_6N1D_018 | 1/A16S/838:848 | No text annotation Not in a motif group | homologous HL_6CZR_089 HL_53837.1 | |
| HL_6N1D_019 | 1/A16S/862:867 | GNRA Not in a motif group | homologous HL_4LFB_019 HL_42097.1 | |
| HL_6N1D_020 | 1/A16S/897:902 | GNRA Not in a motif group | homologous HL_5J7L_020 HL_42097.1 | |
| HL_6N1D_021 | 1/A16S/963:972 | No text annotation Not in a motif group | homologous HL_4LFB_021 NA | |
| HL_6N1D_022 | 1/A16S/1012:1017 | GNRA Not in a motif group | homologous HL_4LFB_022 HL_42097.1 | |
| HL_6N1D_023 | 1/A16S/1028B:1028G | No text annotation Not in a motif group | homologous HL_4LFB_023 NA | |
| HL_6N1D_024 | 1/A16S/1076:1081 | GNRA Not in a motif group | homologous HL_5J7L_023 HL_42097.1 | |
| HL_6N1D_025 | 1/A16S/1089:1096 | No text annotation Not in a motif group | homologous HL_4LFB_025 HL_71554.2 | |
| HL_6N1D_026 | 1/A16S/1134:1140 | No text annotation Not in a motif group | homologous HL_6CZR_097 NA | |
| HL_6N1D_027 | 1/A16S/1165:1171 | GNRA Not in a motif group | homologous HL_4LFB_027 HL_42097.1 | |
| HL_6N1D_028 | 1/A16S/1265:1270 | No text annotation Not in a motif group | homologous HL_6CZR_099 NA | |
| HL_6N1D_029 | 1/A16S/1314:1323 | No text annotation Not in a motif group | homologous HL_4LFB_029 HL_89380.2 | |
| HL_6N1D_030 | 1/A16S/1356:1366 | No text annotation Not in a motif group | homologous HL_4LFB_030 HL_96366.1 | |
| HL_6N1D_031 | 1/A16S/1440G:1440L | No text annotation Not in a motif group | homologous HL_6CZR_102 HL_49722.1 | |
| HL_6N1D_032 | 1/A16S/1515:1520 | No text annotation Not in a motif group | homologous HL_4LFB_032 NA | |
| HL_6N1D_033 | 1/A23S/59:68 | No text annotation Not in a motif group | homologous HL_7A0S_001 HL_99167.1 | |
| HL_6N1D_034 | 1/A23S/87:95 | No text annotation Not in a motif group | homologous HL_7RQB_002 HL_96598.1 | |
| HL_6N1D_035 | 1/A23S/123:128 | No text annotation Not in a motif group | homologous HL_4WF9_003 HL_75407.1 | |
| HL_6N1D_036 | 1/A23S/137A:137F | No text annotation Not in a motif group | homologous HL_7RQB_004 HL_79921.2 | |
| HL_6N1D_037 | 1/A23S/155:171 | No text annotation Not in a motif group | geometric HL_4V88_198 HL_56691.2 | |
| HL_6N1D_038 | 1/A23S/194:201 | No text annotation Not in a motif group | geometric HL_4WF9_006 HL_06192.2 | |
| HL_6N1D_039 | 1/A23S/225:230 | No text annotation Not in a motif group | homologous HL_7A0S_007 HL_02862.2 | |
| HL_6N1D_040 | 1/A23S/246:252 | No text annotation Not in a motif group | homologous HL_7A0S_008 HL_67216.7 | |
| HL_6N1D_041 | 1/A23S/270J:270P | No text annotation Not in a motif group | ||
| HL_6N1D_042 | 1/A23S/305:312 | No text annotation Not in a motif group | homologous HL_7RQB_010 HL_89380.2 | |
| HL_6N1D_043 | 1/A23S/319:323 | No text annotation Not in a motif group | homologous HL_7RQB_011 HL_75407.1 | |
| HL_6N1D_044 | 1/A23S/327:335 | No text annotation Not in a motif group | homologous HL_5J7L_144 HL_08002.8 | |
| HL_6N1D_045 | 1/A23S/382:392 | No text annotation Not in a motif group | homologous HL_7RQB_013 HL_91503.4 | |
| HL_6N1D_046 | 1/A23S/410:417 | No text annotation Not in a motif group | homologous HL_7RQB_014 HL_96598.1 | |
| HL_6N1D_047 | 1/A23S/462:467 | GNRA Not in a motif group | homologous HL_4WF9_015 HL_42097.1 | |
| HL_6N1D_048 | 1/A23S/487:493 | No text annotation Not in a motif group | homologous HL_5J7L_148 HL_42097.1 | |
| HL_6N1D_049 | 1/A23S/543:550 | No text annotation Not in a motif group | geometric HL_5U3G_001 HL_87030.2 | |
| HL_6N1D_050 | 1/A23S/566:575 | No text annotation Not in a motif group | geometric HL_7RQB_018 HL_89380.2 | |
| HL_6N1D_051 | 1/A23S/611A:611G | No text annotation Not in a motif group | geometric HL_4WF9_011 HL_75407.1 | |
| HL_6N1D_052 | 1/A23S/629:634 | GNRA Not in a motif group | homologous HL_5J7L_152 HL_42097.1 | |
| HL_6N1D_053 | 1/A23S/641:647 | GNRA with one bulged base Not in a motif group | homologous HL_4WF9_021 HL_42097.1 | |
| HL_6N1D_054 | 1/A23S/712:719 | No text annotation Not in a motif group | homologous HL_7RQB_022 HL_84085.2 | |
| HL_6N1D_055 | 1/A23S/744:753 | No text annotation Not in a motif group | homologous HL_7RQB_023 HL_39334.6 | |
| HL_6N1D_056 | 1/A23S/779:785 | No text annotation Not in a motif group | geometric HL_5U3G_001 HL_87030.2 | |
| HL_6N1D_057 | 1/A23S/826:831 | No text annotation Not in a motif group | homologous HL_7A0S_024 HL_64365.1 | |
| HL_6N1D_058 | 1/A23S/884:892 | No text annotation Not in a motif group | ||
| HL_6N1D_059 | 1/A23S/955:962 | No text annotation Not in a motif group | homologous HL_7A0S_026 HL_42097.1 | |
| HL_6N1D_060 | 1/A23S/978:985 | No text annotation Not in a motif group | homologous HL_7RQB_028 HL_64430.2 | |
| HL_6N1D_061 | 1/A23S/1064:1074 | No text annotation Not in a motif group | homologous HL_5J7L_161 HL_07145.1 | |
| HL_6N1D_062 | 1/A23S/1092:1099 | No text annotation Not in a motif group | homologous HL_7RQB_030 NA | |
| HL_6N1D_063 | 1/A23S/1171:1178 | No text annotation Not in a motif group | ||
| HL_6N1D_064 | 1/A23S/1222:1227 | No text annotation Not in a motif group | homologous HL_7RQB_032 HL_42097.1 | |
| HL_6N1D_065 | 1/A23S/1281:1289 | No text annotation Not in a motif group | homologous HL_7RQB_033 HL_89380.2 | |
| HL_6N1D_066 | 1/A23S/1324:1330 | No text annotation Not in a motif group | homologous HL_5J7L_166 HL_46680.1 | |
| HL_6N1D_067 | 1/A23S/1363:1368 | Other HL Not in a motif group | homologous HL_5J7L_167 HL_87030.2 | |
| HL_6N1D_068 | 1/A23S/1389:1398 | No text annotation Not in a motif group | homologous HL_7RQB_036 HL_69023.2 | |
| HL_6N1D_069 | 1/A23S/1450:1461 | No text annotation Not in a motif group | ||
| HL_6N1D_070 | 1/A23S/1492:1498 | No text annotation Not in a motif group | ||
| HL_6N1D_071 | 1/A23S/1533:1538 | No text annotation Not in a motif group | geometric HL_4V88_198 HL_56691.2 | |
| HL_6N1D_072 | 1/A23S/1565:1568 | No text annotation Not in a motif group | homologous HL_7RQB_039 HL_38927.2 | |
| HL_6N1D_073 | 1/A23S/1612:1619 | No text annotation Not in a motif group | homologous HL_4WF9_038 HL_64430.2 | |
| HL_6N1D_074 | 1/A23S/1630A:1635 | No text annotation Not in a motif group | homologous HL_7RQB_041 HL_01057.1 | |
| HL_6N1D_075 | 1/A23S/1691:1696 | No text annotation Not in a motif group | homologous HL_7RQB_042 HL_03562.2 | |
| HL_6N1D_076 | 1/A23S/1712F:1712L | No text annotation Not in a motif group | homologous HL_7RQB_043 HL_43656.2 | |
| HL_6N1D_077 | 1/A23S/1752:1756 | No text annotation Not in a motif group | homologous HL_7RQB_044 HL_76539.2 | |
| HL_6N1D_078 | 1/A23S/1777:1787 | No text annotation Not in a motif group | homologous HL_4WF9_043 HL_43613.5 | |
| HL_6N1D_079 | 1/A23S/1806:1811 | No text annotation Not in a motif group | homologous HL_7RQB_046 HL_42097.1 | |
| HL_6N1D_080 | 1/A23S/1864:1878 | No text annotation Not in a motif group | homologous HL_7A0S_047 HL_42097.1 | |
| HL_6N1D_081 | 1/A23S/1910:1920 | No text annotation Not in a motif group | geometric HL_5TBW_049 HL_71924.2 | |
| HL_6N1D_082 | 1/A23S/1949:1957 | No text annotation Not in a motif group | homologous HL_7RQB_049 HL_51824.1 | |
| HL_6N1D_083 | 1/A23S/2027:2036 | No text annotation Not in a motif group | homologous HL_7RQB_050 HL_90642.6 | |
| HL_6N1D_084 | 1/A23S/2143:2148 | No text annotation Not in a motif group | homologous HL_5J7L_184 NA | |
| HL_6N1D_086 | 1/A23S/2248:2256 | No text annotation Not in a motif group | homologous HL_7RQB_053 NA | |
| HL_6N1D_087 | 1/A23S/2264:2276 | No text annotation Not in a motif group | homologous HL_7A0S_053 HL_19870.6 | |
| HL_6N1D_088 | 1/A23S/2303:2313 | No text annotation Not in a motif group | homologous HL_4WF9_051 NA | |
| HL_6N1D_089 | 1/A23S/2324:2331 | No text annotation Not in a motif group | homologous HL_7RQB_056 HL_12078.2 | |
| HL_6N1D_090 | 1/A23S/2355:2362 | No text annotation Not in a motif group | homologous HL_7RQB_057 HL_09136.1 | |
| HL_6N1D_091 | 1/A23S/2374:2379 | GNRA Not in a motif group | homologous HL_4WF9_054 HL_42097.1 | |
| HL_6N1D_092 | 1/A23S/2404:2413 | No text annotation Not in a motif group | homologous HL_7A0S_058 HL_30784.2 | |
| HL_6N1D_093 | 1/A23S/2471:2479 | No text annotation Not in a motif group | homologous HL_4WF9_056 HL_06192.2 | |
| HL_6N1D_094 | 1/A23S/2528:2535 | No text annotation Not in a motif group | homologous HL_7RQB_061 HL_88526.2 | |
| HL_6N1D_095 | 1/A23S/2551:2557 | No text annotation Not in a motif group | homologous HL_5J7L_195 NA | |
| HL_6N1D_096 | 1/A23S/2594:2599 | No text annotation Not in a motif group | homologous HL_7RQB_063 HL_42097.1 | |
| HL_6N1D_097 | 1/A23S/2658:2663 | No text annotation Not in a motif group | homologous HL_7RQB_064 HL_42097.1 | |
| HL_6N1D_098 | 1/A23S/2701:2706 | No text annotation Not in a motif group | homologous HL_7RQB_065 HL_53171.2 | |
| HL_6N1D_099 | 1/A23S/2745:2759 | No text annotation Not in a motif group | homologous HL_7RQB_066 HL_56677.7 | |
| HL_6N1D_100 | 1/A23S/2794:2802 | No text annotation Not in a motif group | geometric HL_5U3G_001 HL_87030.2 | |
| HL_6N1D_101 | 1/A23S/2819:2827 | No text annotation Not in a motif group | homologous HL_7RQB_068 HL_27930.1 | |
| HL_6N1D_102 | 1/A23S/2856:2861 | No text annotation Not in a motif group | homologous HL_7RQB_069 HL_42097.1 | |
| HL_6N1D_103 | 1/A5S/38:44 | No text annotation Not in a motif group | homologous HL_5J7L_203 HL_87939.1 | |
| HL_6N1D_104 | 1/A5S/86:90 | No text annotation Not in a motif group | homologous HL_7A0S_070 HL_42097.1 | |
| HL_6N1D_105 | 1/APTN/13:22 | No text annotation Not in a motif group | homologous HL_3WFS_001 NA | |
| HL_6N1D_106 | 1/APTN/31:39 | No text annotation Not in a motif group | ||
| HL_6N1D_107 | 1/APTN/53:61 | No text annotation Not in a motif group | homologous HL_6CFJ_108 NA | |
| HL_6N1D_108 | 1/B16S/12:22 | No text annotation Not in a motif group | homologous HL_4LFB_001 HL_89881.2 | |
| HL_6N1D_109 | 1/B16S/78:91 | No text annotation Not in a motif group | ||
| HL_6N1D_110 | 1/B16S/158:163 | GNRA Not in a motif group | homologous HL_4LFB_003 HL_42097.1 | |
| HL_6N1D_111 | 1/B16S/186E:186L | No text annotation Not in a motif group | ||
| HL_6N1D_112 | 1/B16S/201:216 | No text annotation Not in a motif group | homologous HL_4LFB_005 HL_56691.2 | |
| HL_6N1D_113 | 1/B16S/259:267 | No text annotation Not in a motif group | homologous HL_4LFB_006 HL_69023.2 | |
| HL_6N1D_114 | 1/B16S/296:301 | GNRA Not in a motif group | homologous HL_4LFB_007 HL_42097.1 | |
| HL_6N1D_115 | 1/B16S/320:333 | No text annotation Not in a motif group | homologous HL_4LFB_008 HL_81205.2 | |
| HL_6N1D_116 | 1/B16S/342:347 | UNCG Not in a motif group | homologous HL_4LFB_009 HL_03562.2 | |
| HL_6N1D_117 | 1/B16S/379:384 | GNRA Not in a motif group | homologous HL_6CZR_081 HL_42097.1 | |
| HL_6N1D_118 | 1/B16S/419:424 | UNCG Not in a motif group | homologous HL_5J7L_011 HL_03562.2 | |
| HL_6N1D_119 | 1/B16S/458:474 | No text annotation Not in a motif group | homologous HL_4LFB_012 HL_43656.2 | |
| HL_6N1D_120 | 1/B16S/522:527 | No text annotation Not in a motif group | geometric HL_4WF9_003 HL_75407.1 | |
| HL_6N1D_121 | 1/B16S/617:623 | No text annotation Not in a motif group | homologous HL_6CZR_085 HL_26881.1 | |
| HL_6N1D_122 | 1/B16S/689:698 | No text annotation Not in a motif group | homologous HL_4LFB_015 HL_12326.1 | |
| HL_6N1D_123 | 1/B16S/726:731 | Other HL Not in a motif group | homologous HL_4LFB_016 HL_87030.2 | |
| HL_6N1D_124 | 1/B16S/786:796 | No text annotation Not in a motif group | homologous HL_6CZR_088 HL_12326.1 | |
| HL_6N1D_125 | 1/B16S/838:848 | No text annotation Not in a motif group | homologous HL_4LFB_018 HL_38927.2 | |
| HL_6N1D_126 | 1/B16S/862:867 | GNRA Not in a motif group | homologous HL_5J7L_019 HL_42097.1 | |
| HL_6N1D_127 | 1/B16S/897:902 | GNRA Not in a motif group | homologous HL_4LFB_020 HL_42097.1 | |
| HL_6N1D_128 | 1/B16S/963:972 | No text annotation Not in a motif group | homologous HL_6CZR_092 NA | |
| HL_6N1D_129 | 1/B16S/1012:1017 | GNRA Not in a motif group | homologous HL_4LFB_022 HL_42097.1 | |
| HL_6N1D_130 | 1/B16S/1028:1033 | No text annotation Not in a motif group | ||
| HL_6N1D_131 | 1/B16S/1076:1081 | GNRA Not in a motif group | homologous HL_5J7L_023 HL_42097.1 | |
| HL_6N1D_132 | 1/B16S/1089:1096 | No text annotation Not in a motif group | homologous HL_4LFB_025 HL_71554.2 | |
| HL_6N1D_133 | 1/B16S/1134:1140 | No text annotation Not in a motif group | homologous HL_5J7L_025 HL_03562.2 | |
| HL_6N1D_134 | 1/B16S/1165:1171 | GNRA Not in a motif group | homologous HL_4LFB_027 HL_42097.1 | |
| HL_6N1D_135 | 1/B16S/1265:1270 | No text annotation Not in a motif group | homologous HL_6CZR_099 NA | |
| HL_6N1D_136 | 1/B16S/1314:1323 | No text annotation Not in a motif group | homologous HL_4LFB_029 HL_89380.2 | |
| HL_6N1D_137 | 1/B16S/1356:1366 | No text annotation Not in a motif group | homologous HL_4LFB_030 HL_96366.1 | |
| HL_6N1D_138 | 1/B16S/1440G:1440L | No text annotation Not in a motif group | ||
| HL_6N1D_139 | 1/B16S/1515:1520 | No text annotation Not in a motif group | homologous HL_6CZR_103 NA | |
| HL_6N1D_140 | 1/B23S/59:68 | No text annotation Not in a motif group | homologous HL_7A0S_001 HL_99167.1 | |
| HL_6N1D_141 | 1/B23S/87:95 | No text annotation Not in a motif group | homologous HL_7RQB_002 HL_96598.1 | |
| HL_6N1D_142 | 1/B23S/123:128 | No text annotation Not in a motif group | homologous HL_4WF9_003 HL_75407.1 | |
| HL_6N1D_143 | 1/B23S/137A:137F | No text annotation Not in a motif group | homologous HL_7RQB_004 HL_79921.2 | |
| HL_6N1D_144 | 1/B23S/155:171 | No text annotation Not in a motif group | geometric HL_4V88_198 HL_56691.2 | |
| HL_6N1D_145 | 1/B23S/194:201 | No text annotation Not in a motif group | geometric HL_4WF9_006 HL_06192.2 | |
| HL_6N1D_146 | 1/B23S/225:230 | No text annotation Not in a motif group | homologous HL_7A0S_007 HL_02862.2 | |
| HL_6N1D_147 | 1/B23S/246:252 | No text annotation Not in a motif group | homologous HL_4WF9_008 HL_67216.7 | |
| HL_6N1D_148 | 1/B23S/270I:270Q | No text annotation Not in a motif group | ||
| HL_6N1D_149 | 1/B23S/305:312 | No text annotation Not in a motif group | homologous HL_7RQB_010 HL_89380.2 | |
| HL_6N1D_150 | 1/B23S/319:323 | No text annotation Not in a motif group | homologous HL_7RQB_011 HL_75407.1 | |
| HL_6N1D_151 | 1/B23S/327:335 | No text annotation Not in a motif group | homologous HL_5J7L_144 HL_08002.8 | |
| HL_6N1D_152 | 1/B23S/382:392 | No text annotation Not in a motif group | homologous HL_7RQB_013 HL_91503.4 | |
| HL_6N1D_153 | 1/B23S/410:417 | No text annotation Not in a motif group | homologous HL_7RQB_014 HL_96598.1 | |
| HL_6N1D_154 | 1/B23S/462:467 | No text annotation Not in a motif group | homologous HL_7A0S_015 HL_42097.1 | |
| HL_6N1D_155 | 1/B23S/487:493 | No text annotation Not in a motif group | homologous HL_5J7L_148 HL_42097.1 | |
| HL_6N1D_156 | 1/B23S/543:550 | Other HL Not in a motif group | geometric HL_1P6V_001 HL_03562.2 | |
| HL_6N1D_157 | 1/B23S/566:575 | No text annotation Not in a motif group | homologous HL_7RQB_018 HL_89380.2 | |
| HL_6N1D_158 | 1/B23S/611A:611G | No text annotation Not in a motif group | homologous HL_7RQB_019 HL_32369.1 | |
| HL_6N1D_159 | 1/B23S/629:634 | GNRA Not in a motif group | homologous HL_4WF9_020 HL_42097.1 | |
| HL_6N1D_160 | 1/B23S/641:647 | GNRA with one bulged base Not in a motif group | homologous HL_4WF9_021 HL_42097.1 | |
| HL_6N1D_161 | 1/B23S/712:719 | No text annotation Not in a motif group | homologous HL_7RQB_022 HL_84085.2 | |
| HL_6N1D_162 | 1/B23S/744:753 | No text annotation Not in a motif group | homologous HL_7RQB_023 HL_39334.6 | |
| HL_6N1D_163 | 1/B23S/779:785 | Other HL Not in a motif group | geometric HL_1P6V_001 HL_03562.2 | |
| HL_6N1D_164 | 1/B23S/826:831 | No text annotation Not in a motif group | homologous HL_5J7L_157 HL_64365.1 | |
| HL_6N1D_166 | 1/B23S/955:962 | No text annotation Not in a motif group | homologous HL_7A0S_026 HL_42097.1 | |
| HL_6N1D_167 | 1/B23S/978:985 | No text annotation Not in a motif group | homologous HL_7RQB_028 HL_64430.2 | |
| HL_6N1D_168 | 1/B23S/1064:1074 | No text annotation Not in a motif group | homologous HL_5J7L_161 HL_07145.1 | |
| HL_6N1D_169 | 1/B23S/1092:1099 | No text annotation Not in a motif group | geometric HL_361D_002 HL_90617.2 | |
| HL_6N1D_170 | 1/B23S/1171:1178 | No text annotation Not in a motif group | geometric HL_5TBW_012 HL_86373.2 | |
| HL_6N1D_171 | 1/B23S/1222:1227 | No text annotation Not in a motif group | homologous HL_7RQB_032 HL_42097.1 | |
| HL_6N1D_172 | 1/B23S/1281:1289 | No text annotation Not in a motif group | homologous HL_7A0S_032 HL_89380.2 | |
| HL_6N1D_173 | 1/B23S/1324:1330 | No text annotation Not in a motif group | homologous HL_5J7L_166 HL_46680.1 | |
| HL_6N1D_174 | 1/B23S/1363:1368 | No text annotation Not in a motif group | homologous HL_7RQB_035 HL_87030.2 | |
| HL_6N1D_175 | 1/B23S/1389:1398 | No text annotation Not in a motif group | homologous HL_7RQB_036 HL_69023.2 | |
| HL_6N1D_176 | 1/B23S/1450:1461 | No text annotation Not in a motif group | homologous HL_7A0S_036 HL_83808.1 | |
| HL_6N1D_177 | 1/B23S/1492:1498 | No text annotation Not in a motif group | homologous HL_5J7L_170 HL_46680.1 | |
| HL_6N1D_178 | 1/B23S/1533:1538 | No text annotation Not in a motif group | geometric HL_4V88_198 HL_56691.2 | |
| HL_6N1D_179 | 1/B23S/1565:1568 | No text annotation Not in a motif group | homologous HL_5J7L_172 HL_38927.2 | |
| HL_6N1D_180 | 1/B23S/1612:1619 | No text annotation Not in a motif group | homologous HL_7RQB_040 HL_64430.2 | |
| HL_6N1D_181 | 1/B23S/1630A:1635 | No text annotation Not in a motif group | homologous HL_7RQB_041 HL_01057.1 | |
| HL_6N1D_182 | 1/B23S/1691:1696 | No text annotation Not in a motif group | homologous HL_7A0S_042 HL_03562.2 | |
| HL_6N1D_183 | 1/B23S/1712F:1712L | No text annotation Not in a motif group | homologous HL_7RQB_043 HL_43656.2 | |
| HL_6N1D_184 | 1/B23S/1752:1756 | No text annotation Not in a motif group | homologous HL_7RQB_044 HL_76539.2 | |
| HL_6N1D_185 | 1/B23S/1777:1787 | No text annotation Not in a motif group | homologous HL_4WF9_043 HL_43613.5 | |
| HL_6N1D_186 | 1/B23S/1806:1811 | No text annotation Not in a motif group | homologous HL_7RQB_046 HL_42097.1 | |
| HL_6N1D_187 | 1/B23S/1864:1878 | No text annotation Not in a motif group | homologous HL_7A0S_047 HL_42097.1 | |
| HL_6N1D_188 | 1/B23S/1910:1920 | No text annotation Not in a motif group | geometric HL_5TBW_049 HL_71924.2 | |
| HL_6N1D_189 | 1/B23S/1949:1957 | No text annotation Not in a motif group | homologous HL_7RQB_049 HL_51824.1 | |
| HL_6N1D_190 | 1/B23S/2027:2036 | No text annotation Not in a motif group | homologous HL_7RQB_050 HL_90642.6 | |
| HL_6N1D_191 | 1/B23S/2143:2148 | UNCG Not in a motif group | homologous HL_3U4M_001 HL_03562.2 | |
| HL_6N1D_192 | 1/B23S/2202B:2202G | No text annotation Not in a motif group | geometric HL_5TBW_004 HL_98426.1 | |
| HL_6N1D_193 | 1/B23S/2248:2256 | No text annotation Not in a motif group | homologous HL_7A0S_052 HL_53171.2 | |
| HL_6N1D_194 | 1/B23S/2264:2276 | No text annotation Not in a motif group | homologous HL_7RQB_054 HL_19870.6 | |
| HL_6N1D_195 | 1/B23S/2303:2313 | No text annotation Not in a motif group | homologous HL_7A0S_054 HL_11805.3 | |
| HL_6N1D_196 | 1/B23S/2324:2331 | No text annotation Not in a motif group | homologous HL_7RQB_056 HL_12078.2 | |
| HL_6N1D_197 | 1/B23S/2355:2362 | No text annotation Not in a motif group | homologous HL_7RQB_057 HL_09136.1 | |
| HL_6N1D_198 | 1/B23S/2374:2379 | GNRA Not in a motif group | homologous HL_4WF9_054 HL_42097.1 | |
| HL_6N1D_199 | 1/B23S/2404:2413 | No text annotation Not in a motif group | homologous HL_7A0S_058 HL_30784.2 | |
| HL_6N1D_200 | 1/B23S/2471:2479 | No text annotation Not in a motif group | homologous HL_7A0S_059 HL_06192.2 | |
| HL_6N1D_201 | 1/B23S/2528:2535 | No text annotation Not in a motif group | homologous HL_7RQB_061 HL_88526.2 | |
| HL_6N1D_202 | 1/B23S/2551:2557 | No text annotation Not in a motif group | homologous HL_4WF9_058 HL_43656.2 | |
| HL_6N1D_203 | 1/B23S/2594:2599 | No text annotation Not in a motif group | homologous HL_7RQB_063 HL_42097.1 | |
| HL_6N1D_204 | 1/B23S/2658:2663 | GNRA Not in a motif group | homologous HL_4WF9_060 HL_42097.1 | |
| HL_6N1D_205 | 1/B23S/2701:2706 | No text annotation Not in a motif group | homologous HL_7RQB_065 HL_53171.2 | |
| HL_6N1D_206 | 1/B23S/2745:2759 | No text annotation Not in a motif group | homologous HL_7RQB_066 HL_56677.7 | |
| HL_6N1D_207 | 1/B23S/2794:2802 | No text annotation Not in a motif group | geometric HL_5U3G_001 HL_87030.2 | |
| HL_6N1D_208 | 1/B23S/2819:2827 | No text annotation Not in a motif group | homologous HL_7RQB_068 HL_27930.1 | |
| HL_6N1D_209 | 1/B23S/2856:2861 | No text annotation Not in a motif group | homologous HL_7A0S_068 HL_42097.1 | |
| HL_6N1D_210 | 1/B5S/38:44 | No text annotation Not in a motif group | geometric HL_2Y9H_003 HL_16173.1 | |
| HL_6N1D_211 | 1/B5S/86:90 | No text annotation Not in a motif group | homologous HL_7A0S_070 HL_42097.1 | |
| HL_6N1D_212 | 1/BATN/12:23 | No text annotation Not in a motif group | homologous HL_5IB8_207 NA | |
| HL_6N1D_213 | 1/BATN/30:40 | No text annotation Not in a motif group | homologous HL_5E81_206 NA | |
| HL_6N1D_215 | 1/BATN/53:61 | No text annotation Not in a motif group | homologous HL_3KFU_006 NA | |
| HL_6N1D_216 | 1/BPTN/13:22 | No text annotation Not in a motif group | homologous HL_6JXM_001 HL_25462.2 | |
| HL_6N1D_217 | 1/BPTN/31:39 | No text annotation Not in a motif group | ||
| HL_6N1D_218 | 1/BPTN/53:61 | No text annotation Not in a motif group | homologous HL_1SER_002 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_6N1D_085 | No text annotation | ||
| HL_6N1D_165 | No text annotation | ||
| HL_6N1D_214 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6N1D_001 | 1/A16S/30:32, 1/A16S/552:553 | Single bulged G Not in a motif group | homologous IL_4LFB_001 IL_00225.2 | |
| IL_6N1D_002 | 1/A16S/44:45, 1/A16S/396:398 | Single bulged A Not in a motif group | homologous IL_5J7L_002 IL_37497.2 | |
| IL_6N1D_003 | 1/A16S/47:52, 1/A16S/359:361 | No text annotation Not in a motif group | geometric IL_4LFB_003 IL_11178.1 | |
| IL_6N1D_004 | 1/A16S/54:56, 1/A16S/356:357 | Minor groove platform Not in a motif group | homologous IL_4LFB_004 IL_93353.1 | |
| IL_6N1D_005 | 1/A16S/63:66, 1/A16S/103:104 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_005 IL_76389.1 | |
| IL_6N1D_006 | 1/A16S/67:69, 1/A16S/100:102 | No text annotation Not in a motif group | homologous IL_4LFB_006 IL_95997.1 | |
| IL_6N1D_007 | 1/A16S/129:131, 1/A16S/231:232 | Multiple bulged bases Not in a motif group | homologous IL_4LFB_007 IL_16396.2 | |
| IL_6N1D_008 | 1/A16S/132:136, 1/A16S/227:230 | No text annotation Not in a motif group | homologous IL_4LFB_008 IL_58764.3 | |
| IL_6N1D_009 | 1/A16S/148:153, 1/A16S/168:174 | tWH-tWH-tHW-tHW Not in a motif group | homologous IL_4LFB_009 IL_39753.1 | |
| IL_6N1D_010 | 1/A16S/186:186B, 1/A16S/186O:191 | No text annotation Not in a motif group | homologous IL_4LFB_010 IL_95997.1 | |
| IL_6N1D_011 | 1/A16S/242:247, 1/A16S/277:284 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_6CZR_123 IL_45067.2 | |
| IL_6N1D_012 | 1/A16S/249:252, 1/A16S/274:275 | No text annotation Not in a motif group | homologous IL_4LFB_012 IL_48100.2 | |
| IL_6N1D_013 | 1/A16S/292:293, 1/A16S/304:308 | C-loop Not in a motif group | homologous IL_6CZR_125 IL_37712.2 | |
| IL_6N1D_014 | 1/A16S/367:369, 1/A16S/392:393 | Single bulged U Not in a motif group | geometric IL_4V88_407 IL_83039.13 | |
| IL_6N1D_015 | 1/A16S/371:375, 1/A16S/389:390 | C-loop Not in a motif group | geometric IL_4LFB_015 IL_75255.1 | |
| IL_6N1D_016 | 1/A16S/375:376, 1/A16S/387:389 | Single bulged G Not in a motif group | homologous IL_4LFB_016 IL_00225.2 | |
| IL_6N1D_017 | 1/A16S/409:416, 1/A16S/427:433 | No text annotation Not in a motif group | homologous IL_4LFB_017 IL_28026.1 | |
| IL_6N1D_018 | 1/A16S/446:450, 1/A16S/483:488 | 6x5 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_4LFB_018 IL_88269.3 | |
| IL_6N1D_019 | 1/A16S/450:455, 1/A16S/477:483 | No text annotation Not in a motif group | homologous IL_4LFB_019 IL_11882.1 | |
| IL_6N1D_020 | 1/A16S/504:511, 1/A16S/540:541 | SSU/LSU pseudoknot Not in a motif group | homologous IL_6CZR_132 IL_15861.7 | |
| IL_6N1D_021 | 1/A16S/515:521, 1/A16S/528:536 | No text annotation Not in a motif group | geometric IL_4V88_415 IL_55871.1 | |
| IL_6N1D_022 | 1/A16S/569:575, 1/A16S/880:881 | No text annotation Not in a motif group | homologous IL_4LFB_022 IL_69996.1 | |
| IL_6N1D_023 | 1/A16S/580:584, 1/A16S/757:761 | tSH-tHW-tHS Not in a motif group | homologous IL_6CZR_135 IL_17136.1 | |
| IL_6N1D_024 | 1/A16S/594:596, 1/A16S/644:645 | Major groove platform Not in a motif group | homologous IL_4LFB_024 IL_27635.1 | |
| IL_6N1D_025 | 1/A16S/597:598, 1/A16S/640:643 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_4LFB_025 IL_09061.6 | |
| IL_6N1D_026 | 1/A16S/605:612, 1/A16S/628:633 | No text annotation Not in a motif group | homologous IL_4LFB_026 IL_78349.1 | |
| IL_6N1D_027 | 1/A16S/654:655, 1/A16S/751:754 | Major groove platform; stack outside cWW Not in a motif group | geometric IL_4LFB_027 IL_50694.2 | |
| IL_6N1D_028 | 1/A16S/657:658, 1/A16S/747:749 | Major groove platform Not in a motif group | homologous IL_4LFB_028 IL_27635.1 | |
| IL_6N1D_029 | 1/A16S/662:666, 1/A16S/740:743 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_4LFB_029 IL_71110.1 | |
| IL_6N1D_030 | 1/A16S/673:678, 1/A16S/712:717 | No text annotation Not in a motif group | geometric IL_4LFB_030 IL_04668.1 | |
| IL_6N1D_031 | 1/A16S/683:688, 1/A16S/699:707 | No text annotation Not in a motif group | homologous IL_6CZR_143 IL_37722.1 | |
| IL_6N1D_032 | 1/A16S/774:778, 1/A16S/804:805 | Left turn Not in a motif group | homologous IL_5J7L_036 IL_29346.1 | |
| IL_6N1D_033 | 1/A16S/779:783, 1/A16S/799:803 | tSH-tHW-tHS Not in a motif group | homologous IL_6CZR_145 IL_17136.1 | |
| IL_6N1D_034 | 1/A16S/887:894, 1/A16S/905:910 | 8x6 Sarcin-Ricin with inserted Y; G-bulge Not in a motif group | homologous IL_5J7L_038 IL_24606.2 | |
| IL_6N1D_035 | 1/A16S/922:923, 1/A16S/1393:1395 | Single bulged A Not in a motif group | homologous IL_5J7L_039 IL_37497.2 | |
| IL_6N1D_036 | 1/A16S/925:927, 1/A16S/1390:1391 | Single bulged G Not in a motif group | homologous IL_4LFB_036 IL_00225.2 | |
| IL_6N1D_037 | 1/A16S/933:935, 1/A16S/1380:1384 | Minor groove platform Not in a motif group | homologous IL_5J7L_041 IL_47078.1 | |
| IL_6N1D_038 | 1/A16S/953:954, 1/A16S/1226:1228 | No text annotation Not in a motif group | homologous IL_6CZR_150 NA | |
| IL_6N1D_039 | 1/A16S/993:997, 1/A16S/1044:1045 | Minor groove platform Not in a motif group | geometric IL_6CZR_151 IL_47078.1 | |
| IL_6N1D_040 | 1/A16S/1048:1050, 1/A16S/1208:1209 | Single bulged U Not in a motif group | homologous IL_4LFB_042 IL_83039.13 | |
| IL_6N1D_041 | 1/A16S/1052:1056, 1/A16S/1204:1206 | Isolated cWS basepair Not in a motif group | homologous IL_4LFB_044 IL_76319.2 | |
| IL_6N1D_042 | 1/A16S/1057:1058, 1/A16S/1199:1203 | Minor groove platform Not in a motif group | homologous IL_5J7L_048 IL_93353.1 | |
| IL_6N1D_043 | 1/A16S/1060:1061, 1/A16S/1195:1197 | Single bulged U Not in a motif group | homologous IL_6CZR_156 IL_83039.13 | |
| IL_6N1D_044 | 1/A16S/1061:1063, 1/A16S/1193:1195 | UU cWW Not in a motif group | geometric IL_4E48_006 IL_95997.1 | |
| IL_6N1D_045 | 1/A16S/1124:1127, 1/A16S/1145:1149 | No text annotation Not in a motif group | ||
| IL_6N1D_046 | 1/A16S/1127:1128, 1/A16S/1143:1145 | Single stack bend Not in a motif group | geometric IL_5TBW_070 IL_76488.2 | |
| IL_6N1D_047 | 1/A16S/1128:1132, 1/A16S/1142:1143 | Minor groove platform Not in a motif group | geometric IL_4LFB_049 IL_15052.1 | |
| IL_6N1D_048 | 1/A16S/1158:1161, 1/A16S/1175:1181 | No text annotation Not in a motif group | homologous IL_5J7L_053 IL_42032.1 | |
| IL_6N1D_049 | 1/A16S/1247:1253, 1/A16S/1284:1290 | No text annotation Not in a motif group | homologous IL_4LFB_051 IL_09129.1 | |
| IL_6N1D_050 | 1/A16S/1255:1258, 1/A16S/1277:1282 | No text annotation Not in a motif group | homologous IL_4LFB_052 IL_84205.1 | |
| IL_6N1D_051 | 1/A16S/1259:1260, 1/A16S/1274:1276 | Not an internal loop Not in a motif group | geometric IL_4LFB_053 IL_93353.1 | |
| IL_6N1D_052 | 1/A16S/1260:1262, 1/A16S/1273:1274 | Minor groove platform Not in a motif group | homologous IL_4LFB_054 IL_93353.1 | |
| IL_6N1D_053 | 1/A16S/1303:1309, 1/A16S/1328:1334 | No text annotation Not in a motif group | ||
| IL_6N1D_054 | 1/A16S/1399:1401, 1/A16S/1501:1504 | No text annotation Not in a motif group | geometric IL_4V88_463 IL_36143.3 | |
| IL_6N1D_055 | 1/A16S/1401:1405, 1/A16S/1496:1501 | No text annotation Not in a motif group | ||
| IL_6N1D_056 | 1/A16S/1405:1407, 1/A16S/1494:1496 | No text annotation Not in a motif group | geometric IL_5MWI_002 IL_95997.1 | |
| IL_6N1D_057 | 1/A16S/1407:1409, 1/A16S/1491:1494 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_5J7L_009 IL_82068.2 | |
| IL_6N1D_058 | 1/A16S/1412:1414, 1/A16S/1486:1488 | No text annotation Not in a motif group | homologous IL_4LFB_059 IL_95997.1 | |
| IL_6N1D_059 | 1/A16S/1416:1419, 1/A16S/1481:1484 | Double sheared Not in a motif group | homologous IL_6CZR_169 IL_09705.9 | |
| IL_6N1D_060 | 1/A16S/1431:1435, 1/A16S/1466:1469 | UAA/GAN variation Not in a motif group | homologous IL_6CZR_170 IL_07235.1 | |
| IL_6N1D_061 | 1/A16S/1435:1437, 1/A16S/1464:1466 | No text annotation Not in a motif group | geometric IL_4LFB_063 IL_95997.1 | |
| IL_6N1D_062 | 1/A16S/1440:1440E, 1/A16S/1440N:1461 | No text annotation Not in a motif group | homologous IL_4LFB_064 IL_92788.2 | |
| IL_6N1D_063 | 1/A23S/24:30, 1/A23S/510:516 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_7RQB_001 IL_66414.6 | |
| IL_6N1D_064 | 1/A23S/36:37, 1/A23S/442:444 | Single bulged A Not in a motif group | homologous IL_7RQB_002 IL_37497.2 | |
| IL_6N1D_065 | 1/A23S/43:44, 1/A23S/434:436 | Minor groove platform Not in a motif group | homologous IL_7RQB_003 IL_42622.2 | |
| IL_6N1D_066 | 1/A23S/81:85, 1/A23S/97:105 | Kink-turn Not in a motif group | homologous IL_7RQB_004 IL_45067.2 | |
| IL_6N1D_067 | 1/A23S/183:184, 1/A23S/212:214 | Single stack bend Not in a motif group | homologous IL_7RQB_005 IL_76488.2 | |
| IL_6N1D_068 | 1/A23S/188:194, 1/A23S/201:208 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7A0S_006 IL_04346.7 | |
| IL_6N1D_069 | 1/A23S/239:245, 1/A23S/253:258 | 7x6 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_007 IL_76042.2 | |
| IL_6N1D_070 | 1/A23S/271F:271G, 1/A23S/357K:357M | No text annotation Not in a motif group | ||
| IL_6N1D_071 | 1/A23S/271L:271Q, 1/A23S/357E:357F | No text annotation Not in a motif group | ||
| IL_6N1D_072 | 1/A23S/271S:283, 1/A23S/357:357C | tSH-tHW Not in a motif group | homologous IL_7RQB_011 IL_04059.1 | |
| IL_6N1D_073 | 1/A23S/287:290, 1/A23S/350:353 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_7RQB_012 IL_38958.7 | |
| IL_6N1D_074 | 1/A23S/293:295, 1/A23S/343:347 | No text annotation Not in a motif group | homologous IL_7RQB_013 IL_69440.1 | |
| IL_6N1D_075 | 1/A23S/481:484, 1/A23S/496:509 | No text annotation Not in a motif group | homologous IL_5J7L_255 IL_60992.6 | |
| IL_6N1D_076 | 1/A23S/564:566, 1/A23S/575:577 | No text annotation Not in a motif group | homologous IL_7RQB_015 IL_95997.1 | |
| IL_6N1D_077 | 1/A23S/606:610, 1/A23S/618:622 | AAA cross-strand stack Not in a motif group | homologous IL_7RQB_016 IL_17136.1 | |
| IL_6N1D_078 | 1/A23S/672:674, 1/A23S/806:808 | No text annotation Not in a motif group | geometric IL_7RQB_017 IL_95997.1 | |
| IL_6N1D_079 | 1/A23S/674:678, 1/A23S/799:806 | No text annotation Not in a motif group | homologous IL_7A0S_015 IL_17470.6 | |
| IL_6N1D_080 | 1/A23S/697:698, 1/A23S/763:765 | Single bulged A Not in a motif group | geometric IL_7RQB_019 IL_37497.2 | |
| IL_6N1D_081 | 1/A23S/702:703, 1/A23S/728:730 | Single bulged G Not in a motif group | homologous IL_4WF9_023 IL_00225.2 | |
| IL_6N1D_082 | 1/A23S/703:707, 1/A23S/724:728 | Triple sheared Not in a motif group | geometric IL_4V9F_027 IL_56467.8 | |
| IL_6N1D_083 | 1/A23S/738:741, 1/A23S/756:758 | Major groove platform with extra cWW Not in a motif group | homologous IL_7RQB_022 IL_05564.2 | |
| IL_6N1D_084 | 1/A23S/775:777, 1/A23S/787:791 | Multiple bulged bases Not in a motif group | geometric IL_4V9F_030 IL_90991.6 | |
| IL_6N1D_085 | 1/A23S/837:838, 1/A23S/940:942 | Single stack bend Not in a motif group | homologous IL_7A0S_022 IL_92001.1 | |
| IL_6N1D_086 | 1/A23S/844:846, 1/A23S/931:934 | Intercalated cWW Not in a motif group | homologous IL_7RQB_025 IL_52767.2 | |
| IL_6N1D_087 | 1/A23S/846:850, 1/A23S/928:931 | No text annotation Not in a motif group | geometric IL_7RQB_026 IL_94165.1 | |
| IL_6N1D_088 | 1/A23S/857:862, 1/A23S/915:920 | 5x5 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | homologous IL_7A0S_027 IL_81631.1 | |
| IL_6N1D_089 | 1/A23S/862:863, 1/A23S/913:915 | Minor groove platform Not in a motif group | geometric IL_7RQB_028 IL_42622.2 | |
| IL_6N1D_090 | 1/A23S/864:868, 1/A23S/909:912 | C-loop Not in a motif group | homologous IL_7RQB_029 IL_02509.1 | |
| IL_6N1D_091 | 1/A23S/875:877, 1/A23S/899:902 | Minor groove platform with extra cWW Not in a motif group | geometric IL_7RQB_031 IL_46796.1 | |
| IL_6N1D_092 | 1/A23S/877:879, 1/A23S/898:899 | Minor groove platform Not in a motif group | homologous IL_7RQB_032 IL_93353.1 | |
| IL_6N1D_093 | 1/A23S/880:881, 1/A23S/895:897 | No text annotation Not in a motif group | homologous IL_5J7L_275 NA | |
| IL_6N1D_094 | 1/A23S/952:954, 1/A23S/963:965 | No text annotation Not in a motif group | homologous IL_7A0S_031 IL_95997.1 | |
| IL_6N1D_095 | 1/A23S/994:996, 1/A23S/1159:1160 | Single bulged C Not in a motif group | homologous IL_7RQB_035 IL_61258.12 | |
| IL_6N1D_096 | 1/A23S/998:1002, 1/A23S/1153:1157 | UAA/GAN Not in a motif group | homologous IL_7A0S_033 IL_89002.2 | |
| IL_6N1D_097 | 1/A23S/1004:1011, 1/A23S/1150:1151 | SSU/LSU pseudoknot Not in a motif group | homologous IL_4WF9_037 IL_15861.7 | |
| IL_6N1D_098 | 1/A23S/1011:1013, 1/A23S/1149:1150 | Single bulged U Not in a motif group | geometric IL_5J7L_279 IL_83039.13 | |
| IL_6N1D_099 | 1/A23S/1018:1024, 1/A23S/1140:1144 | No text annotation Not in a motif group | geometric IL_4WF9_039 IL_57188.3 | |
| IL_6N1D_100 | 1/A23S/1024:1030, 1/A23S/1124:1140 | No text annotation Not in a motif group | geometric IL_7RQB_040 IL_50715.1 | |
| IL_6N1D_101 | 1/A23S/1031:1034, 1/A23S/1121:1123 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_7RQB_041 IL_82068.2 | |
| IL_6N1D_102 | 1/A23S/1043:1051, 1/A23S/1108:1112 | Kink-turn Not in a motif group | homologous IL_5J7L_284 IL_90538.4 | |
| IL_6N1D_103 | 1/A23S/1059:1062, 1/A23S/1076:1079 | No text annotation Not in a motif group | ||
| IL_6N1D_104 | 1/A23S/1087:1091, 1/A23S/1100:1102 | No text annotation Not in a motif group | homologous IL_7RQB_044 NA | |
| IL_6N1D_105 | 1/A23S/1196:1198, 1/A23S/1247:1250 | Isolated cWS basepair Not in a motif group | homologous IL_7A0S_041 IL_52767.2 | |
| IL_6N1D_106 | 1/A23S/1202:1207, 1/A23S/1239:1243 | No text annotation Not in a motif group | ||
| IL_6N1D_107 | 1/A23S/1208:1215, 1/A23S/1234:1238 | Kink-turn Not in a motif group | homologous IL_7A0S_043 IL_70923.2 | |
| IL_6N1D_108 | 1/A23S/1219:1220, 1/A23S/1229:1230 | Single bulged A Not in a motif group | homologous IL_7RQB_048 IL_37497.2 | |
| IL_6N1D_109 | 1/A23S/1262:1269, 1/A23S/2011:2017 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_049 IL_04346.7 | |
| IL_6N1D_110 | 1/A23S/1310:1313, 1/A23S/1603:1604 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_7RQB_050 IL_50694.2 | |
| IL_6N1D_111 | 1/A23S/1319:1323, 1/A23S/1331:1333 | C-loop Not in a motif group | homologous IL_5J7L_291 IL_63596.6 | |
| IL_6N1D_112 | 1/A23S/1351:1355, 1/A23S/1376:1380 | UAA/GAN Not in a motif group | homologous IL_7RQB_052 IL_89002.2 | |
| IL_6N1D_113 | 1/A23S/1357:1361, 1/A23S/1370:1374 | tSH-tHW-tHS Not in a motif group | homologous IL_7RQB_053 IL_17136.1 | |
| IL_6N1D_114 | 1/A23S/1415:1416, 1/A23S/1582:1587 | No text annotation Not in a motif group | homologous IL_7RQB_054 IL_67474.4 | |
| IL_6N1D_115 | 1/A23S/1417:1421, 1/A23S/1577:1581 | UAA/GAN Not in a motif group | homologous IL_5J7L_295 IL_89002.2 | |
| IL_6N1D_116 | 1/A23S/1432:1435, 1/A23S/1557:1561 | No text annotation Not in a motif group | ||
| IL_6N1D_117 | 1/A23S/1437:1440, 1/A23S/1551:1555 | tSH-tHW Not in a motif group | homologous IL_7RQB_057 IL_04059.1 | |
| IL_6N1D_118 | 1/A23S/1448:1449, 1/A23S/1462:1463 | Single stack bend Not in a motif group | homologous IL_7RQB_058 IL_76488.2 | |
| IL_6N1D_119 | 1/A23S/1468A:1468E, 1/A23S/1506M:1506P | UAA/GAN Not in a motif group | homologous IL_7RQB_060 IL_07235.1 | |
| IL_6N1D_120 | 1/A23S/1468M:1483, 1/A23S/1506:1506E | No text annotation Not in a motif group | homologous IL_7RQB_061 IL_52493.1 | |
| IL_6N1D_121 | 1/A23S/1489:1491, 1/A23S/1499:1500 | Single bulged A Not in a motif group | homologous IL_7RQB_062 IL_37497.2 | |
| IL_6N1D_122 | 1/A23S/1526:1530, 1/A23S/1541:1546 | No text annotation Not in a motif group | homologous IL_7RQB_063 IL_02656.1 | |
| IL_6N1D_123 | 1/A23S/1651:1656, 1/A23S/2004:2006 | No text annotation Not in a motif group | homologous IL_7RQB_064 IL_12566.2 | |
| IL_6N1D_124 | 1/A23S/1663:1665, 1/A23S/1995:1997 | Isolated tWW turn Not in a motif group | homologous IL_7RQB_065 IL_54997.7 | |
| IL_6N1D_125 | 1/A23S/1666:1669, 1/A23S/1993:1994 | Major groove platform; stack outside cWW Not in a motif group | geometric IL_4WF9_064 IL_50694.2 | |
| IL_6N1D_126 | 1/A23S/1669:1674, 1/A23S/1990:1993 | Intercalated tWH Not in a motif group | homologous IL_7A0S_062 IL_82842.2 | |
| IL_6N1D_127 | 1/A23S/1686:1691, 1/A23S/1696:1702 | tSH-tSH-tHH-tHS Not in a motif group | geometric IL_7RQB_068 IL_65969.2 | |
| IL_6N1D_128 | 1/A23S/1770:1771, 1/A23S/1980:1982 | Single bulged A Not in a motif group | homologous IL_7RQB_069 IL_37497.2 | |
| IL_6N1D_129 | 1/A23S/1798:1804, 1/A23S/1813:1821 | Kink-turn related Not in a motif group | homologous IL_7A0S_065 IL_17069.3 | |
| IL_6N1D_130 | 1/A23S/1837:1840, 1/A23S/1902:1903 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_7RQB_071 IL_88739.1 | |
| IL_6N1D_131 | 1/A23S/1841:1842, 1/A23S/1898:1901 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_315 IL_16396.2 | |
| IL_6N1D_132 | 1/A23S/1846:1849, 1/A23S/1893:1894 | Minor groove platform Not in a motif group | homologous IL_7RQB_073 IL_88739.1 | |
| IL_6N1D_133 | 1/A23S/1851:1856, 1/A23S/1886:1891 | No text annotation Not in a motif group | ||
| IL_6N1D_134 | 1/A23S/1856:1860, 1/A23S/1882:1886 | Triple sheared Not in a motif group | homologous IL_7A0S_070 IL_56467.8 | |
| IL_6N1D_135 | 1/A23S/1933:1934, 1/A23S/1964:1967 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_318 IL_59677.2 | |
| IL_6N1D_136 | 1/A23S/1934:1945, 1/A23S/1961:1964 | No text annotation Not in a motif group | geometric IL_4WF9_077 IL_81589.2 | |
| IL_6N1D_137 | 1/A23S/2050:2052, 1/A23S/2617:2618 | Major groove platform Not in a motif group | homologous IL_5J7L_320 IL_27635.1 | |
| IL_6N1D_138 | 1/A23S/2067:2069, 1/A23S/2442:2443 | Single bulged U Not in a motif group | homologous IL_7A0S_075 IL_83039.13 | |
| IL_6N1D_139 | 1/A23S/2070:2071, 1/A23S/2438:2441 | Minor groove platform Not in a motif group | homologous IL_7RQB_081 IL_42622.2 | |
| IL_6N1D_140 | 1/A23S/2081:2083, 1/A23S/2236:2239 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_7RQB_082 IL_38958.7 | |
| IL_6N1D_141 | 1/A23S/2085:2087, 1/A23S/2232:2234 | No text annotation Not in a motif group | homologous IL_7RQB_083 IL_95997.1 | |
| IL_6N1D_142 | 1/A23S/2108:2110, 1/A23S/2179:2181 | CC cWW Not in a motif group | geometric IL_4KNQ_002 IL_95997.1 | |
| IL_6N1D_143 | 1/A23S/2110:2120, 1/A23S/2178:2179 | No text annotation Not in a motif group | homologous IL_7RQB_085 NA | |
| IL_6N1D_144 | 1/A23S/2124:2127, 1/A23S/2161:2174 | No text annotation Not in a motif group | homologous IL_3U4M_003 IL_75283.2 | |
| IL_6N1D_145 | 1/A23S/2129:2137, 1/A23S/2154:2159 | No text annotation Not in a motif group | ||
| IL_6N1D_146 | 1/A23S/2297:2299, 1/A23S/2317:2321 | Isolated tHS basepair with bulges Not in a motif group | geometric IL_7RQB_088 IL_38958.7 | |
| IL_6N1D_147 | 1/A23S/2350:2353, 1/A23S/2364:2367 | Double sheared Not in a motif group | homologous IL_7RQB_089 IL_09705.9 | |
| IL_6N1D_148 | 1/A23S/2401:2403, 1/A23S/2414:2415 | Single bulged U Not in a motif group | homologous IL_5J7L_334 IL_83039.13 | |
| IL_6N1D_149 | 1/A23S/2453:2454, 1/A23S/2498:2500 | Single stack bend Not in a motif group | homologous IL_4WF9_089 IL_76488.2 | |
| IL_6N1D_150 | 1/A23S/2454:2455, 1/A23S/2496:2498 | Major groove platform Not in a motif group | geometric IL_5J7L_320 IL_27635.1 | |
| IL_6N1D_151 | 1/A23S/2456:2459, 1/A23S/2493:2495 | Major groove platform with extra pair Not in a motif group | geometric IL_7RQB_093 IL_63450.2 | |
| IL_6N1D_152 | 1/A23S/2459:2461, 1/A23S/2489:2493 | Major groove minor groove platform with extra cWW Not in a motif group | homologous IL_7A0S_086 IL_92788.2 | |
| IL_6N1D_153 | 1/A23S/2466:2470, 1/A23S/2480:2484 | Triple sheared Not in a motif group | homologous IL_7A0S_087 IL_56467.8 | |
| IL_6N1D_154 | 1/A23S/2510:2512, 1/A23S/2574:2578 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_7RQB_097 IL_90933.2 | |
| IL_6N1D_155 | 1/A23S/2512:2513, 1/A23S/2571:2574 | Multiple bulged bases Not in a motif group | geometric IL_7A0S_090 IL_71530.2 | |
| IL_6N1D_156 | 1/A23S/2522:2523, 1/A23S/2540:2543 | Minor groove platform with intercalation Not in a motif group | homologous IL_5J7L_342 IL_95601.3 | |
| IL_6N1D_157 | 1/A23S/2591:2592, 1/A23S/2601:2603 | Single bulged A Not in a motif group | homologous IL_7RQB_101 IL_37497.2 | |
| IL_6N1D_158 | 1/A23S/2636:2640, 1/A23S/2774:2782 | tSH-tHS-tHW Not in a motif group | homologous IL_7RQB_102 IL_04638.1 | |
| IL_6N1D_159 | 1/A23S/2652:2658, 1/A23S/2663:2668 | Sarcin-Ricin target in LSU H95; G-bulge Not in a motif group | geometric IL_7A0S_094 IL_16458.1 | |
| IL_6N1D_160 | 1/A23S/2680:2684, 1/A23S/2725:2727 | C-loop Not in a motif group | homologous IL_7RQB_104 IL_63596.6 | |
| IL_6N1D_161 | 1/A23S/2687:2691, 1/A23S/2718:2722 | No text annotation Not in a motif group | homologous IL_7A0S_096 IL_08296.3 | |
| IL_6N1D_162 | 1/A23S/2695:2696, 1/A23S/2711:2714 | Multiple bulged bases Not in a motif group | homologous IL_7RQB_106 IL_71530.2 | |
| IL_6N1D_163 | 1/A23S/2737:2742, 1/A23S/2762:2767 | UAA/GAN with extra cWW Not in a motif group | homologous IL_7RQB_107 IL_49767.5 | |
| IL_6N1D_164 | 1/A23S/2838:2839, 1/A23S/2878:2880 | Single bulged C Not in a motif group | homologous IL_7RQB_108 IL_61258.12 | |
| IL_6N1D_165 | 1/A23S/2843:2845, 1/A23S/2871:2874 | Decoding loop related Not in a motif group | homologous IL_7A0S_100 IL_02284.5 | |
| IL_6N1D_166 | 1/A23S/2847:2853, 1/A23S/2864:2869 | No text annotation Not in a motif group | ||
| IL_6N1D_167 | 1/A5S/17:18, 1/A5S/65:67 | Major groove intercalation Not in a motif group | homologous IL_7RQB_111 IL_37497.2 | |
| IL_6N1D_168 | 1/A5S/23:28, 1/A5S/56:60 | No text annotation Not in a motif group | homologous IL_5J7L_356 IL_18472.2 | |
| IL_6N1D_170 | 1/A5S/34:38, 1/A5S/44:48 | Symmetric double minor groove platform Not in a motif group | geometric IL_7RQB_114 IL_58103.6 | |
| IL_6N1D_171 | 1/A5S/71:79, 1/A5S/97:105 | Bacterial 5S Loop E Not in a motif group | homologous IL_5J7L_359 IL_56455.3 | |
| IL_6N1D_172 | 1/B16S/30:32, 1/B16S/552:553 | Single bulged G Not in a motif group | homologous IL_5J7L_001 IL_00225.2 | |
| IL_6N1D_173 | 1/B16S/44:45, 1/B16S/396:398 | Single bulged A Not in a motif group | homologous IL_4LFB_002 IL_37497.2 | |
| IL_6N1D_174 | 1/B16S/47:52, 1/B16S/359:361 | No text annotation Not in a motif group | homologous IL_4LFB_003 IL_11178.1 | |
| IL_6N1D_175 | 1/B16S/54:56, 1/B16S/356:357 | Minor groove platform Not in a motif group | homologous IL_4LFB_004 IL_93353.1 | |
| IL_6N1D_176 | 1/B16S/63:66, 1/B16S/103:104 | Multiple bulged bases Not in a motif group | homologous IL_5J7L_005 IL_76389.1 | |
| IL_6N1D_177 | 1/B16S/67:69, 1/B16S/100:102 | No text annotation Not in a motif group | homologous IL_4LFB_006 IL_95997.1 | |
| IL_6N1D_178 | 1/B16S/128:131, 1/B16S/231:233 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5J7L_009 IL_82068.2 | |
| IL_6N1D_179 | 1/B16S/132:136, 1/B16S/227:230 | No text annotation Not in a motif group | homologous IL_4LFB_008 IL_58764.3 | |
| IL_6N1D_180 | 1/B16S/148:153, 1/B16S/168:174 | tWH-tWH-tHW-tHW Not in a motif group | homologous IL_4LFB_009 IL_39753.1 | |
| IL_6N1D_181 | 1/B16S/186:186B, 1/B16S/186O:191 | No text annotation Not in a motif group | homologous IL_4LFB_010 IL_95997.1 | |
| IL_6N1D_182 | 1/B16S/242:247, 1/B16S/277:284 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_4LFB_011 IL_45067.2 | |
| IL_6N1D_183 | 1/B16S/249:252, 1/B16S/274:275 | No text annotation Not in a motif group | homologous IL_4LFB_012 IL_48100.2 | |
| IL_6N1D_184 | 1/B16S/292:293, 1/B16S/304:308 | C-loop Not in a motif group | homologous IL_6CZR_125 IL_37712.2 | |
| IL_6N1D_185 | 1/B16S/367:369, 1/B16S/392:393 | Single bulged U Not in a motif group | homologous IL_4LFB_014 IL_83039.13 | |
| IL_6N1D_186 | 1/B16S/371:375, 1/B16S/389:390 | C-loop Not in a motif group | geometric IL_5J7L_018 IL_75255.1 | |
| IL_6N1D_187 | 1/B16S/375:376, 1/B16S/387:389 | Single bulged G Not in a motif group | homologous IL_4LFB_016 IL_00225.2 | |
| IL_6N1D_188 | 1/B16S/409:416, 1/B16S/427:433 | No text annotation Not in a motif group | homologous IL_4LFB_017 IL_28026.1 | |
| IL_6N1D_189 | 1/B16S/446:450, 1/B16S/483:488 | 6x5 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_4LFB_018 IL_88269.3 | |
| IL_6N1D_190 | 1/B16S/450:455, 1/B16S/477:483 | No text annotation Not in a motif group | geometric IL_4LFB_019 IL_11882.1 | |
| IL_6N1D_191 | 1/B16S/504:511, 1/B16S/540:541 | SSU/LSU pseudoknot Not in a motif group | homologous IL_4LFB_020 IL_15861.7 | |
| IL_6N1D_192 | 1/B16S/515:521, 1/B16S/528:536 | No text annotation Not in a motif group | ||
| IL_6N1D_193 | 1/B16S/569:575, 1/B16S/880:881 | No text annotation Not in a motif group | homologous IL_5J7L_026 IL_69996.1 | |
| IL_6N1D_194 | 1/B16S/580:584, 1/B16S/757:761 | tSH-tHW-tHS Not in a motif group | homologous IL_5J7L_027 IL_17136.1 | |
| IL_6N1D_195 | 1/B16S/594:596, 1/B16S/644:645 | Major groove platform Not in a motif group | homologous IL_4LFB_024 IL_27635.1 | |
| IL_6N1D_196 | 1/B16S/597:598, 1/B16S/640:643 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_6CZR_137 IL_09061.6 | |
| IL_6N1D_197 | 1/B16S/604:612, 1/B16S/628:634 | No text annotation Not in a motif group | ||
| IL_6N1D_198 | 1/B16S/654:655, 1/B16S/751:754 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4LFB_027 IL_50694.2 | |
| IL_6N1D_199 | 1/B16S/657:658, 1/B16S/747:749 | Major groove platform Not in a motif group | homologous IL_4LFB_028 IL_27635.1 | |
| IL_6N1D_200 | 1/B16S/662:666, 1/B16S/740:743 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_6CZR_141 IL_71110.1 | |
| IL_6N1D_201 | 1/B16S/673:678, 1/B16S/712:717 | No text annotation Not in a motif group | geometric IL_4LFB_030 IL_04668.1 | |
| IL_6N1D_202 | 1/B16S/683:688, 1/B16S/699:707 | No text annotation Not in a motif group | homologous IL_6CZR_143 IL_37722.1 | |
| IL_6N1D_203 | 1/B16S/774:778, 1/B16S/804:805 | Left turn Not in a motif group | homologous IL_5J7L_036 IL_29346.1 | |
| IL_6N1D_204 | 1/B16S/779:783, 1/B16S/799:803 | tSH-tHW-tHS Not in a motif group | homologous IL_6CZR_145 IL_17136.1 | |
| IL_6N1D_205 | 1/B16S/887:894, 1/B16S/905:910 | 8x6 Sarcin-Ricin with inserted Y; G-bulge Not in a motif group | homologous IL_5J7L_038 IL_24606.2 | |
| IL_6N1D_206 | 1/B16S/922:923, 1/B16S/1393:1395 | Single bulged A Not in a motif group | homologous IL_5J7L_039 IL_37497.2 | |
| IL_6N1D_207 | 1/B16S/925:927, 1/B16S/1390:1391 | Single bulged G Not in a motif group | homologous IL_5J7L_040 IL_00225.2 | |
| IL_6N1D_208 | 1/B16S/933:935, 1/B16S/1380:1384 | Minor groove platform Not in a motif group | homologous IL_4LFB_037 IL_47078.1 | |
| IL_6N1D_209 | 1/B16S/953:954, 1/B16S/1226:1228 | Minor groove platform Not in a motif group | homologous IL_4LFB_038 IL_42622.2 | |
| IL_6N1D_210 | 1/B16S/993:997, 1/B16S/1044:1045 | Minor groove platform Not in a motif group | geometric IL_6CZR_151 IL_47078.1 | |
| IL_6N1D_211 | 1/B16S/1048:1050, 1/B16S/1208:1209 | Single bulged U Not in a motif group | homologous IL_4LFB_042 IL_83039.13 | |
| IL_6N1D_212 | 1/B16S/1051:1056, 1/B16S/1204:1207 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_473 IL_30621.2 | |
| IL_6N1D_213 | 1/B16S/1057:1058, 1/B16S/1199:1203 | Minor groove platform Not in a motif group | homologous IL_5J7L_048 IL_93353.1 | |
| IL_6N1D_214 | 1/B16S/1060:1061, 1/B16S/1195:1197 | Single bulged U Not in a motif group | geometric IL_4V88_469 IL_83039.13 | |
| IL_6N1D_215 | 1/B16S/1061:1063, 1/B16S/1193:1195 | UU cWW Not in a motif group | geometric IL_4E48_006 IL_95997.1 | |
| IL_6N1D_216 | 1/B16S/1124:1127, 1/B16S/1145:1149 | No text annotation Not in a motif group | ||
| IL_6N1D_217 | 1/B16S/1127:1128, 1/B16S/1143:1145 | Single stack bend Not in a motif group | geometric IL_4LFB_041 IL_76488.2 | |
| IL_6N1D_218 | 1/B16S/1128:1132, 1/B16S/1142:1143 | No text annotation Not in a motif group | ||
| IL_6N1D_219 | 1/B16S/1158:1161, 1/B16S/1175:1181 | No text annotation Not in a motif group | geometric IL_5J7L_053 IL_42032.1 | |
| IL_6N1D_220 | 1/B16S/1247:1253, 1/B16S/1284:1290 | No text annotation Not in a motif group | homologous IL_4LFB_051 IL_09129.1 | |
| IL_6N1D_221 | 1/B16S/1255:1258, 1/B16S/1277:1282 | No text annotation Not in a motif group | homologous IL_4LFB_052 IL_84205.1 | |
| IL_6N1D_222 | 1/B16S/1259:1262, 1/B16S/1273:1276 | Double sheared Not in a motif group | geometric IL_4V88_471 IL_09705.9 | |
| IL_6N1D_223 | 1/B16S/1303:1308, 1/B16S/1329:1334 | No text annotation Not in a motif group | geometric IL_4V88_462 IL_19954.2 | |
| IL_6N1D_224 | 1/B16S/1399:1401, 1/B16S/1501:1504 | No text annotation Not in a motif group | homologous IL_5J7L_058 IL_36143.3 | |
| IL_6N1D_225 | 1/B16S/1401:1404, 1/B16S/1497:1501 | No text annotation Not in a motif group | geometric IL_4V88_464 IL_99670.1 | |
| IL_6N1D_226 | 1/B16S/1405:1407, 1/B16S/1494:1496 | No text annotation Not in a motif group | geometric IL_5VCI_002 IL_95997.1 | |
| IL_6N1D_227 | 1/B16S/1407:1409, 1/B16S/1491:1494 | Decoding loop related Not in a motif group | geometric IL_3C3Z_002 IL_64417.1 | |
| IL_6N1D_228 | 1/B16S/1412:1414, 1/B16S/1486:1488 | No text annotation Not in a motif group | homologous IL_5J7L_061 IL_95997.1 | |
| IL_6N1D_229 | 1/B16S/1416:1419, 1/B16S/1481:1484 | Double sheared Not in a motif group | homologous IL_6CZR_169 IL_09705.9 | |
| IL_6N1D_230 | 1/B16S/1431:1435, 1/B16S/1466:1469 | UAA/GAN variation Not in a motif group | geometric IL_4LFB_062 IL_07235.1 | |
| IL_6N1D_231 | 1/B16S/1435:1437, 1/B16S/1464:1466 | No text annotation Not in a motif group | homologous IL_4LFB_063 IL_95997.1 | |
| IL_6N1D_232 | 1/B16S/1440:1440G, 1/B16S/1440L:1461 | No text annotation Not in a motif group | ||
| IL_6N1D_233 | 1/B23S/24:30, 1/B23S/510:516 | Triple sheared with non-canonical cWW Not in a motif group | geometric IL_7RQB_001 IL_66414.6 | |
| IL_6N1D_234 | 1/B23S/36:37, 1/B23S/442:444 | Single bulged A Not in a motif group | homologous IL_7RQB_002 IL_37497.2 | |
| IL_6N1D_235 | 1/B23S/43:44, 1/B23S/434:436 | Minor groove platform Not in a motif group | homologous IL_7RQB_003 IL_42622.2 | |
| IL_6N1D_236 | 1/B23S/81:85, 1/B23S/97:105 | Kink-turn Not in a motif group | homologous IL_7A0S_004 IL_45067.2 | |
| IL_6N1D_237 | 1/B23S/183:184, 1/B23S/212:214 | Single stack bend Not in a motif group | homologous IL_7RQB_005 IL_76488.2 | |
| IL_6N1D_238 | 1/B23S/188:194, 1/B23S/201:208 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_006 IL_04346.7 | |
| IL_6N1D_239 | 1/B23S/239:245, 1/B23S/253:258 | 7x6 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_007 IL_76042.2 | |
| IL_6N1D_240 | 1/B23S/271F:271H, 1/B23S/357J:357M | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_3KTW_002 IL_82068.2 | |
| IL_6N1D_241 | 1/B23S/271L:271Q, 1/B23S/357E:357F | No text annotation Not in a motif group | ||
| IL_6N1D_242 | 1/B23S/271S:283, 1/B23S/357:357C | tSH-tHW Not in a motif group | homologous IL_7RQB_011 IL_04059.1 | |
| IL_6N1D_243 | 1/B23S/287:290, 1/B23S/350:353 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_7RQB_012 IL_38958.7 | |
| IL_6N1D_244 | 1/B23S/293:295, 1/B23S/343:347 | No text annotation Not in a motif group | homologous IL_7RQB_013 IL_69440.1 | |
| IL_6N1D_245 | 1/B23S/481:484, 1/B23S/496:509 | No text annotation Not in a motif group | geometric IL_7A0S_009 IL_60992.6 | |
| IL_6N1D_246 | 1/B23S/564:566, 1/B23S/575:577 | CC cWW Not in a motif group | geometric IL_4E59_001 IL_95997.1 | |
| IL_6N1D_247 | 1/B23S/606:610, 1/B23S/618:622 | AAA cross-strand stack Not in a motif group | homologous IL_7RQB_016 IL_17136.1 | |
| IL_6N1D_248 | 1/B23S/672:674, 1/B23S/806:808 | No text annotation Not in a motif group | geometric IL_4WF9_020 IL_95997.1 | |
| IL_6N1D_249 | 1/B23S/674:678, 1/B23S/799:806 | No text annotation Not in a motif group | homologous IL_7A0S_015 IL_17470.6 | |
| IL_6N1D_250 | 1/B23S/697:698, 1/B23S/763:765 | Single bulged A Not in a motif group | geometric IL_7RQB_019 IL_37497.2 | |
| IL_6N1D_251 | 1/B23S/702:703, 1/B23S/728:730 | Single bulged G Not in a motif group | homologous IL_4WF9_023 IL_00225.2 | |
| IL_6N1D_252 | 1/B23S/703:707, 1/B23S/724:728 | Triple sheared Not in a motif group | geometric IL_7RQB_021 IL_56467.8 | |
| IL_6N1D_253 | 1/B23S/738:741, 1/B23S/756:758 | Major groove platform with extra cWW Not in a motif group | homologous IL_7RQB_022 IL_05564.2 | |
| IL_6N1D_254 | 1/B23S/775:777, 1/B23S/787:791 | Multiple bulged bases Not in a motif group | geometric IL_7A0S_021 IL_90991.6 | |
| IL_6N1D_255 | 1/B23S/836:838, 1/B23S/940:943 | No text annotation Not in a motif group | geometric IL_4N0T_004 IL_46796.1 | |
| IL_6N1D_256 | 1/B23S/844:846, 1/B23S/931:934 | Intercalated cWW Not in a motif group | geometric IL_7RQB_025 IL_52767.2 | |
| IL_6N1D_257 | 1/B23S/846:850, 1/B23S/928:931 | No text annotation Not in a motif group | homologous IL_7RQB_026 IL_94165.1 | |
| IL_6N1D_258 | 1/B23S/857:862, 1/B23S/915:920 | 5x5 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | geometric IL_7A0S_027 IL_81631.1 | |
| IL_6N1D_259 | 1/B23S/862:863, 1/B23S/913:915 | Minor groove platform Not in a motif group | homologous IL_7RQB_028 IL_42622.2 | |
| IL_6N1D_260 | 1/B23S/864:868, 1/B23S/909:912 | C-loop Not in a motif group | homologous IL_7RQB_029 IL_02509.1 | |
| IL_6N1D_261 | 1/B23S/875:877, 1/B23S/899:902 | Minor groove platform with extra cWW Not in a motif group | homologous IL_7RQB_031 IL_46796.1 | |
| IL_6N1D_262 | 1/B23S/877:879, 1/B23S/898:899 | Minor groove platform Not in a motif group | geometric IL_4V88_412 IL_93353.1 | |
| IL_6N1D_263 | 1/B23S/880:881, 1/B23S/895:897 | No text annotation Not in a motif group | homologous IL_5J7L_275 NA | |
| IL_6N1D_264 | 1/B23S/952:954, 1/B23S/963:965 | No text annotation Not in a motif group | homologous IL_7A0S_031 IL_95997.1 | |
| IL_6N1D_265 | 1/B23S/994:996, 1/B23S/1159:1160 | Single bulged C Not in a motif group | homologous IL_7RQB_035 IL_61258.12 | |
| IL_6N1D_266 | 1/B23S/998:1002, 1/B23S/1153:1157 | UAA/GAN Not in a motif group | homologous IL_7A0S_033 IL_89002.2 | |
| IL_6N1D_267 | 1/B23S/1004:1011, 1/B23S/1150:1151 | SSU/LSU pseudoknot Not in a motif group | geometric IL_5J7L_278 IL_15861.7 | |
| IL_6N1D_268 | 1/B23S/1011:1013, 1/B23S/1149:1150 | Single bulged U Not in a motif group | homologous IL_7RQB_038 IL_83039.13 | |
| IL_6N1D_269 | 1/B23S/1018:1024, 1/B23S/1140:1144 | No text annotation Not in a motif group | geometric IL_4WF9_039 IL_57188.3 | |
| IL_6N1D_270 | 1/B23S/1024:1030, 1/B23S/1124:1140 | No text annotation Not in a motif group | geometric IL_7RQB_040 IL_50715.1 | |
| IL_6N1D_271 | 1/B23S/1031:1034, 1/B23S/1121:1123 | Isolated non-canonical cWW with bulges Not in a motif group | homologous IL_5J7L_282 IL_82068.2 | |
| IL_6N1D_272 | 1/B23S/1043:1052, 1/B23S/1107:1112 | No text annotation Not in a motif group | ||
| IL_6N1D_273 | 1/B23S/1059:1062, 1/B23S/1076:1079 | No text annotation Not in a motif group | ||
| IL_6N1D_274 | 1/B23S/1087:1091, 1/B23S/1100:1102 | No text annotation Not in a motif group | homologous IL_7RQB_044 NA | |
| IL_6N1D_275 | 1/B23S/1196:1198, 1/B23S/1247:1250 | Isolated cWS basepair Not in a motif group | homologous IL_4WF9_044 IL_52767.2 | |
| IL_6N1D_276 | 1/B23S/1202:1206, 1/B23S/1240:1243 | No text annotation Not in a motif group | homologous IL_7RQB_046 IL_68574.2 | |
| IL_6N1D_277 | 1/B23S/1208:1215, 1/B23S/1234:1238 | Kink-turn Not in a motif group | homologous IL_7RQB_047 IL_70923.2 | |
| IL_6N1D_278 | 1/B23S/1219:1220, 1/B23S/1229:1230 | Single bulged A Not in a motif group | homologous IL_7RQB_048 IL_37497.2 | |
| IL_6N1D_279 | 1/B23S/1262:1269, 1/B23S/2011:2017 | 8x7 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_7RQB_049 IL_04346.7 | |
| IL_6N1D_280 | 1/B23S/1310:1313, 1/B23S/1603:1604 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_7RQB_050 IL_50694.2 | |
| IL_6N1D_281 | 1/B23S/1319:1323, 1/B23S/1331:1333 | Major groove minor groove platform with tHH Not in a motif group | homologous IL_4WF9_050 IL_37712.2 | |
| IL_6N1D_282 | 1/B23S/1351:1355, 1/B23S/1376:1380 | UAA/GAN Not in a motif group | homologous IL_7RQB_052 IL_89002.2 | |
| IL_6N1D_283 | 1/B23S/1357:1361, 1/B23S/1370:1374 | tSH-tHW-tHS Not in a motif group | homologous IL_4WF9_052 IL_17136.1 | |
| IL_6N1D_284 | 1/B23S/1415:1416, 1/B23S/1582:1587 | No text annotation Not in a motif group | homologous IL_7RQB_054 IL_67474.4 | |
| IL_6N1D_285 | 1/B23S/1417:1421, 1/B23S/1577:1581 | No text annotation Not in a motif group | ||
| IL_6N1D_286 | 1/B23S/1432:1435, 1/B23S/1557:1561 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_5J7L_296 IL_55178.1 | |
| IL_6N1D_287 | 1/B23S/1437:1440, 1/B23S/1551:1555 | tSH-tHW Not in a motif group | homologous IL_7RQB_057 IL_04059.1 | |
| IL_6N1D_288 | 1/B23S/1448:1449, 1/B23S/1462:1463 | Single stack bend Not in a motif group | homologous IL_7RQB_058 IL_76488.2 | |
| IL_6N1D_289 | 1/B23S/1468A:1468F, 1/B23S/1506L:1506P | No text annotation Not in a motif group | ||
| IL_6N1D_290 | 1/B23S/1468M:1483, 1/B23S/1506:1506E | No text annotation Not in a motif group | ||
| IL_6N1D_291 | 1/B23S/1489:1491, 1/B23S/1499:1500 | Single bulged A Not in a motif group | homologous IL_7RQB_062 IL_37497.2 | |
| IL_6N1D_292 | 1/B23S/1526:1530, 1/B23S/1541:1546 | No text annotation Not in a motif group | homologous IL_7RQB_063 IL_02656.1 | |
| IL_6N1D_293 | 1/B23S/1651:1656, 1/B23S/2004:2006 | No text annotation Not in a motif group | homologous IL_5J7L_304 IL_12566.2 | |
| IL_6N1D_294 | 1/B23S/1663:1665, 1/B23S/1995:1997 | Isolated tWW turn Not in a motif group | homologous IL_7RQB_065 IL_54997.7 | |
| IL_6N1D_295 | 1/B23S/1666:1669, 1/B23S/1993:1994 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_7RQB_066 IL_50694.2 | |
| IL_6N1D_296 | 1/B23S/1669:1674, 1/B23S/1990:1993 | Intercalated tWH Not in a motif group | geometric IL_7RQB_067 IL_82842.2 | |
| IL_6N1D_297 | 1/B23S/1686:1691, 1/B23S/1696:1702 | tSH-tSH-tHH-tHS Not in a motif group | geometric IL_7RQB_068 IL_65969.2 | |
| IL_6N1D_298 | 1/B23S/1770:1771, 1/B23S/1980:1982 | Single bulged A Not in a motif group | homologous IL_5J7L_312 IL_37497.2 | |
| IL_6N1D_299 | 1/B23S/1798:1804, 1/B23S/1813:1821 | Kink-turn related Not in a motif group | homologous IL_7A0S_065 IL_17069.3 | |
| IL_6N1D_300 | 1/B23S/1837:1840, 1/B23S/1902:1903 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_7RQB_071 IL_88739.1 | |
| IL_6N1D_301 | 1/B23S/1841:1842, 1/B23S/1898:1901 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5J7L_315 IL_16396.2 | |
| IL_6N1D_302 | 1/B23S/1846:1849, 1/B23S/1893:1894 | Minor groove platform Not in a motif group | homologous IL_7RQB_073 IL_88739.1 | |
| IL_6N1D_303 | 1/B23S/1851:1855, 1/B23S/1887:1891 | UAA/GAN with extra pair Not in a motif group | homologous IL_7RQB_074 IL_90318.1 | |
| IL_6N1D_304 | 1/B23S/1856:1860, 1/B23S/1882:1886 | Triple sheared Not in a motif group | homologous IL_7RQB_075 IL_56467.8 | |
| IL_6N1D_305 | 1/B23S/1933:1934, 1/B23S/1964:1967 | Multiple bulged bases Not in a motif group | geometric IL_7A0S_071 IL_59677.2 | |
| IL_6N1D_306 | 1/B23S/1934:1945, 1/B23S/1961:1964 | No text annotation Not in a motif group | homologous IL_4WF9_077 IL_81589.2 | |
| IL_6N1D_307 | 1/B23S/2050:2052, 1/B23S/2617:2618 | Major groove platform Not in a motif group | homologous IL_7RQB_078 IL_27635.1 | |
| IL_6N1D_308 | 1/B23S/2054:2057, 1/B23S/2611:2615 | No text annotation Not in a motif group | ||
| IL_6N1D_309 | 1/B23S/2067:2069, 1/B23S/2442:2443 | Single bulged U Not in a motif group | homologous IL_7A0S_075 IL_83039.13 | |
| IL_6N1D_310 | 1/B23S/2070:2071, 1/B23S/2438:2441 | Minor groove platform Not in a motif group | homologous IL_5J7L_324 IL_42622.2 | |
| IL_6N1D_311 | 1/B23S/2081:2083, 1/B23S/2236:2239 | Isolated tHS basepair with bulges Not in a motif group | homologous IL_7RQB_082 IL_38958.7 | |
| IL_6N1D_312 | 1/B23S/2085:2087, 1/B23S/2232:2234 | No text annotation Not in a motif group | homologous IL_7A0S_078 IL_95997.1 | |
| IL_6N1D_313 | 1/B23S/2108:2110, 1/B23S/2179:2181 | No text annotation Not in a motif group | geometric IL_5J7L_259 IL_95997.1 | |
| IL_6N1D_314 | 1/B23S/2110:2120, 1/B23S/2178:2179 | No text annotation Not in a motif group | homologous IL_3U4M_002 IL_45944.3 | |
| IL_6N1D_315 | 1/B23S/2124:2127, 1/B23S/2161:2174 | No text annotation Not in a motif group | homologous IL_3U4M_003 IL_75283.2 | |
| IL_6N1D_316 | 1/B23S/2129:2136, 1/B23S/2155:2159 | Kink-turn Not in a motif group | homologous IL_5J7L_330 IL_70923.2 | |
| IL_6N1D_317 | 1/B23S/2297:2299, 1/B23S/2317:2321 | Isolated tHS basepair with bulges Not in a motif group | geometric IL_4V9F_080 IL_38958.7 | |
| IL_6N1D_318 | 1/B23S/2350:2353, 1/B23S/2364:2367 | Double sheared Not in a motif group | homologous IL_7RQB_089 IL_09705.9 | |
| IL_6N1D_319 | 1/B23S/2401:2403, 1/B23S/2414:2415 | Single bulged U Not in a motif group | homologous IL_5J7L_334 IL_83039.13 | |
| IL_6N1D_320 | 1/B23S/2453:2454, 1/B23S/2498:2500 | Single stack bend Not in a motif group | geometric IL_7KGA_003 IL_76488.2 | |
| IL_6N1D_321 | 1/B23S/2454:2455, 1/B23S/2496:2498 | Major groove platform Not in a motif group | homologous IL_4WF9_090 IL_27635.1 | |
| IL_6N1D_322 | 1/B23S/2457:2459, 1/B23S/2493:2494 | Major groove platform Not in a motif group | geometric IL_7A0S_085 IL_27635.1 | |
| IL_6N1D_323 | 1/B23S/2459:2461, 1/B23S/2489:2493 | Major groove minor groove platform with extra cWW Not in a motif group | homologous IL_7RQB_094 IL_92788.2 | |
| IL_6N1D_324 | 1/B23S/2466:2470, 1/B23S/2480:2484 | Triple sheared Not in a motif group | homologous IL_5J7L_338 IL_56467.8 | |
| IL_6N1D_325 | 1/B23S/2507:2508, 1/B23S/2580:2582 | Major groove platform Not in a motif group | homologous IL_4WF9_094 IL_76223.2 | |
| IL_6N1D_326 | 1/B23S/2510:2512, 1/B23S/2574:2578 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_5J7L_340 IL_90933.2 | |
| IL_6N1D_327 | 1/B23S/2512:2513, 1/B23S/2571:2574 | No text annotation Not in a motif group | homologous IL_4WF9_096 IL_71530.2 | |
| IL_6N1D_328 | 1/B23S/2522:2523, 1/B23S/2540:2543 | Minor groove platform with intercalation Not in a motif group | homologous IL_5J7L_342 IL_95601.3 | |
| IL_6N1D_329 | 1/B23S/2591:2592, 1/B23S/2601:2603 | Single bulged A Not in a motif group | homologous IL_5J7L_344 IL_37497.2 | |
| IL_6N1D_330 | 1/B23S/2636:2640, 1/B23S/2774:2782 | tSH-tHS-tHW Not in a motif group | homologous IL_7RQB_102 IL_04638.1 | |
| IL_6N1D_331 | 1/B23S/2652:2658, 1/B23S/2663:2668 | Sarcin-Ricin target in LSU H95; G-bulge Not in a motif group | geometric IL_5J7L_346 IL_16458.1 | |
| IL_6N1D_332 | 1/B23S/2680:2684, 1/B23S/2725:2727 | C-loop Not in a motif group | homologous IL_7RQB_104 IL_63596.6 | |
| IL_6N1D_333 | 1/B23S/2687:2691, 1/B23S/2718:2722 | No text annotation Not in a motif group | homologous IL_4WF9_102 IL_08296.3 | |
| IL_6N1D_334 | 1/B23S/2695:2696, 1/B23S/2711:2714 | Multiple bulged bases Not in a motif group | homologous IL_7A0S_097 IL_71530.2 | |
| IL_6N1D_335 | 1/B23S/2737:2742, 1/B23S/2762:2767 | UAA/GAN with extra cWW Not in a motif group | homologous IL_7RQB_107 IL_49767.5 | |
| IL_6N1D_336 | 1/B23S/2838:2839, 1/B23S/2878:2880 | Single bulged C Not in a motif group | homologous IL_7RQB_108 IL_61258.12 | |
| IL_6N1D_337 | 1/B23S/2843:2845, 1/B23S/2871:2874 | Decoding loop related Not in a motif group | homologous IL_7A0S_100 IL_02284.5 | |
| IL_6N1D_338 | 1/B23S/2847:2853, 1/B23S/2864:2869 | No text annotation Not in a motif group | ||
| IL_6N1D_339 | 1/B5S/17:18, 1/B5S/65:67 | Major groove intercalation Not in a motif group | homologous IL_7RQB_111 IL_37497.2 | |
| IL_6N1D_340 | 1/B5S/23:28, 1/B5S/56:60 | No text annotation Not in a motif group | homologous IL_5J7L_356 IL_18472.2 | |
| IL_6N1D_341 | 1/B5S/30:31, 1/B5S/51:54 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_7RQB_113 IL_09061.6 | |
| IL_6N1D_342 | 1/B5S/34:38, 1/B5S/44:48 | Symmetric double minor groove platform Not in a motif group | homologous IL_7RQB_114 IL_58103.6 | |
| IL_6N1D_343 | 1/B5S/71:79, 1/B5S/97:105 | Bacterial 5S Loop E Not in a motif group | homologous IL_7RQB_115 IL_56455.3 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_6N1D_169 | Major groove minor groove platform; mini C-loop |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_6N1D_001 | 1/A16S/46:47, 1/A16S/361:367, 1/A16S/393:395 | No text annotation Not in a motif group | homologous J3_6CZR_015 NA | |
| J3_6N1D_002 | 1/A16S/586:588, 1/A16S/651:654, 1/A16S/754:755 | No text annotation Not in a motif group | homologous J3_5J7L_002 NA | |
| J3_6N1D_003 | 1/A16S/672:673, 1/A16S/717:725, 1/A16S/732:734 | No text annotation Not in a motif group | homologous J3_6CZR_017 NA | |
| J3_6N1D_004 | 1/A16S/826:829, 1/A16S/857:861, 1/A16S/868:874 | No text annotation Not in a motif group | homologous J3_6CZR_018 NA | |
| J3_6N1D_005 | 1/A16S/943:946, 1/A16S/1235:1237, 1/A16S/1337:1340 | No text annotation Not in a motif group | homologous J3_4LFB_003 NA | |
| J3_6N1D_006 | 1/A16S/955:962, 1/A16S/973:984, 1/A16S/1221:1225 | No text annotation Not in a motif group | ||
| J3_6N1D_007 | 1/A16S/990:993, 1/A16S/1045:1047, 1/A16S/1210:1215 | No text annotation Not in a motif group | homologous J3_4LFB_005 NA | |
| J3_6N1D_008 | 1/A16S/1003:1006, 1/A16S/1023:1027, 1/A16S/1034:1037 | No text annotation Not in a motif group | ||
| J3_6N1D_009 | 1/A16S/1063:1068, 1/A16S/1107:1113, 1/A16S/1187:1193 | No text annotation Not in a motif group | ||
| J3_6N1D_010 | 1/A16S/1073:1074, 1/A16S/1083:1087, 1/A16S/1098:1102 | No text annotation Not in a motif group | homologous J3_6CZR_024 NA | |
| J3_6N1D_011 | 1/A16S/1116:1118, 1/A16S/1155:1158, 1/A16S/1181:1184 | No text annotation Not in a motif group | ||
| J3_6N1D_012 | 1/A16S/1237:1241, 1/A16S/1296:1303, 1/A16S/1334:1337 | No text annotation Not in a motif group | ||
| J3_6N1D_013 | 1/A23S/30:31, 1/A23S/474:481, 1/A23S/509:510 | No text annotation Not in a motif group | ||
| J3_6N1D_014 | 1/A23S/56:57, 1/A23S/70:76, 1/A23S/110:114 | No text annotation Not in a motif group | homologous J3_7A0S_002 NA | |
| J3_6N1D_015 | 1/A23S/269:270C, 1/A23S/270W:271D, 1/A23S/357O:370 | No text annotation Not in a motif group | homologous J3_7RQB_003 NA | |
| J3_6N1D_016 | 1/A23S/683:689, 1/A23S/773:775, 1/A23S/791:794 | No text annotation Not in a motif group | homologous J3_7A0S_004 NA | |
| J3_6N1D_017 | 1/A23S/698:700, 1/A23S/732:736, 1/A23S/760:763 | No text annotation Not in a motif group | homologous J3_4WF9_003 NA | |
| J3_6N1D_018 | 1/A23S/1055:1057, 1/A23S/1081:1087, 1/A23S/1102:1104 | No text annotation Not in a motif group | ||
| J3_6N1D_019 | 1/A23S/1298:1303, 1/A23S/1625:1627, 1/A23S/1639:1642 | No text annotation Not in a motif group | homologous J3_7RQB_007 NA | |
| J3_6N1D_020 | 1/A23S/1306:1309, 1/A23S/1605:1611, 1/A23S/1620:1622 | No text annotation Not in a motif group | homologous J3_7RQB_008 NA | |
| J3_6N1D_021 | 1/A23S/1344:1350, 1/A23S/1381:1385, 1/A23S/1402:1403 | No text annotation Not in a motif group | homologous J3_7RQB_009 NA | |
| J3_6N1D_022 | 1/A23S/2091:2093, 1/A23S/2196:2200, 1/A23S/2223:2228 | No text annotation Not in a motif group | homologous J3_7RQB_010 NA | |
| J3_6N1D_023 | 1/A23S/2295:2297, 1/A23S/2321:2323, 1/A23S/2332:2337 | No text annotation Not in a motif group | homologous J3_7RQB_011 NA | |
| J3_6N1D_024 | 1/A23S/2517:2520, 1/A23S/2545:2547, 1/A23S/2561:2567 | No text annotation Not in a motif group | homologous J3_7RQB_012 NA | |
| J3_6N1D_025 | 1/A23S/2814:2815, 1/A23S/2831:2836, 1/A23S/2882:2886 | No text annotation Not in a motif group | ||
| J3_6N1D_026 | 1/A5S/11:16, 1/A5S/68:69, 1/A5S/107:109 | No text annotation Not in a motif group | homologous J3_7RQB_015 NA | |
| J3_6N1D_027 | 1/B16S/46:47, 1/B16S/361:367, 1/B16S/393:395 | No text annotation Not in a motif group | ||
| J3_6N1D_028 | 1/B16S/586:588, 1/B16S/651:654, 1/B16S/754:755 | No text annotation Not in a motif group | ||
| J3_6N1D_029 | 1/B16S/672:673, 1/B16S/717:725, 1/B16S/732:734 | No text annotation Not in a motif group | homologous J3_6CZR_017 NA | |
| J3_6N1D_030 | 1/B16S/826:829, 1/B16S/857:861, 1/B16S/868:874 | No text annotation Not in a motif group | homologous J3_4LFB_001 NA | |
| J3_6N1D_031 | 1/B16S/936:939, 1/B16S/1344:1350, 1/B16S/1372:1379 | No text annotation Not in a motif group | homologous J3_4LFB_002 NA | |
| J3_6N1D_032 | 1/B16S/943:946, 1/B16S/1235:1237, 1/B16S/1337:1340 | No text annotation Not in a motif group | ||
| J3_6N1D_033 | 1/B16S/955:962, 1/B16S/973:984, 1/B16S/1221:1225 | No text annotation Not in a motif group | ||
| J3_6N1D_034 | 1/B16S/990:993, 1/B16S/1045:1047, 1/B16S/1210:1215 | No text annotation Not in a motif group | homologous J3_4LFB_005 NA | |
| J3_6N1D_035 | 1/B16S/1003:1006, 1/B16S/1023:1027, 1/B16S/1034:1037 | No text annotation Not in a motif group | ||
| J3_6N1D_036 | 1/B16S/1063:1068, 1/B16S/1107:1113, 1/B16S/1187:1193 | No text annotation Not in a motif group | ||
| J3_6N1D_037 | 1/B16S/1073:1074, 1/B16S/1083:1087, 1/B16S/1098:1102 | No text annotation Not in a motif group | homologous J3_6CZR_024 NA | |
| J3_6N1D_038 | 1/B16S/1116:1118, 1/B16S/1155:1158, 1/B16S/1181:1184 | No text annotation Not in a motif group | homologous J3_4LFB_008 NA | |
| J3_6N1D_039 | 1/B16S/1237:1241, 1/B16S/1296:1303, 1/B16S/1334:1337 | No text annotation Not in a motif group | homologous J3_4LFB_009 NA | |
| J3_6N1D_040 | 1/B23S/30:31, 1/B23S/474:481, 1/B23S/509:510 | No text annotation Not in a motif group | homologous J3_7A0S_001 NA | |
| J3_6N1D_041 | 1/B23S/56:57, 1/B23S/70:76, 1/B23S/110:114 | No text annotation Not in a motif group | homologous J3_7A0S_002 NA | |
| J3_6N1D_042 | 1/B23S/269:270C, 1/B23S/270W:271D, 1/B23S/357O:370 | No text annotation Not in a motif group | homologous J3_7RQB_003 NA | |
| J3_6N1D_043 | 1/B23S/683:689, 1/B23S/773:775, 1/B23S/791:794 | No text annotation Not in a motif group | homologous J3_7A0S_004 NA | |
| J3_6N1D_044 | 1/B23S/698:700, 1/B23S/732:736, 1/B23S/760:763 | No text annotation Not in a motif group | homologous J3_7RQB_005 NA | |
| J3_6N1D_045 | 1/B23S/1055:1057, 1/B23S/1081:1087, 1/B23S/1102:1104 | No text annotation Not in a motif group | ||
| J3_6N1D_046 | 1/B23S/1298:1303, 1/B23S/1625:1627, 1/B23S/1639:1642 | No text annotation Not in a motif group | homologous J3_7RQB_007 NA | |
| J3_6N1D_047 | 1/B23S/1306:1309, 1/B23S/1605:1611, 1/B23S/1620:1622 | No text annotation Not in a motif group | homologous J3_7RQB_008 NA | |
| J3_6N1D_048 | 1/B23S/1344:1350, 1/B23S/1381:1385, 1/B23S/1402:1403 | No text annotation Not in a motif group | homologous J3_7RQB_009 NA | |
| J3_6N1D_049 | 1/B23S/2091:2093, 1/B23S/2196:2200, 1/B23S/2223:2228 | No text annotation Not in a motif group | homologous J3_7RQB_010 NA | |
| J3_6N1D_050 | 1/B23S/2282:2284, 1/B23S/2384:2395, 1/B23S/2421:2427 | No text annotation Not in a motif group | ||
| J3_6N1D_051 | 1/B23S/2295:2297, 1/B23S/2321:2323, 1/B23S/2332:2337 | No text annotation Not in a motif group | homologous J3_7RQB_011 NA | |
| J3_6N1D_052 | 1/B23S/2517:2520, 1/B23S/2545:2547, 1/B23S/2561:2567 | No text annotation Not in a motif group | homologous J3_7RQB_012 NA | |
| J3_6N1D_053 | 1/B23S/2814:2815, 1/B23S/2831:2836, 1/B23S/2882:2886 | No text annotation Not in a motif group | ||
| J3_6N1D_054 | 1/B5S/11:16, 1/B5S/68:69, 1/B5S/107:109 | No text annotation Not in a motif group | homologous J3_7RQB_015 NA |
Problematic loops
No problematic loops
Coloring options: